RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
SHMT2-221ENST00000555773 SUSD4Q5VX71 490 aa15.71■□□□□ 0.11
SHMT2-221ENST00000555773 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-221ENST00000555773 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SHMT2-221ENST00000555773 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
SHMT2-221ENST00000555773 UBN2Q6ZU65 1347 aa15.7■□□□□ 0.1
SHMT2-221ENST00000555773 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-221ENST00000555773 GRM8O00222 908 aa15.7■□□□□ 0.1
SHMT2-221ENST00000555773 GNAI3P08754 354 aa15.7■□□□□ 0.1
SHMT2-221ENST00000555773 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-221ENST00000555773 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
SHMT2-221ENST00000555773 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
SHMT2-221ENST00000555773 UTYO14607 1347 aa15.69■□□□□ 0.1
SHMT2-221ENST00000555773 POLRMTO00411 1230 aaKnown RBP15.69■□□□□ 0.1
SHMT2-221ENST00000555773 SERPINB2P05120 415 aa15.69■□□□□ 0.1
SHMT2-221ENST00000555773 MMP10P09238 476 aa15.69■□□□□ 0.1
SHMT2-221ENST00000555773 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-221ENST00000555773 AAMPQ13685 434 aa15.69■□□□□ 0.1
SHMT2-221ENST00000555773 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
SHMT2-221ENST00000555773 NTSR2O95665 410 aa15.68■□□□□ 0.1
SHMT2-221ENST00000555773 NEFLP07196 543 aa15.68■□□□□ 0.1
SHMT2-221ENST00000555773 SLC10A5Q5PT55 438 aa15.68■□□□□ 0.1
SHMT2-221ENST00000555773 MSL1Q68DK7 614 aa15.68■□□□□ 0.1
SHMT2-221ENST00000555773 FAM177BA6PVY3 158 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 ZBTB7AO95365 584 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 UBTFL1P0CB47 393 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-221ENST00000555773 POLD1P28340 1107 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 CASP7P55210 303 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 DDR1Q08345 913 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 FAM89AQ96GI7 184 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 CRBNQ96SW2 442 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 QSER1Q2KHR3 1735 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
SHMT2-221ENST00000555773 NPHP1O15259 732 aa15.66■□□□□ 0.1
SHMT2-221ENST00000555773 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-221ENST00000555773 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
SHMT2-221ENST00000555773 CNBD1Q8NA66 436 aa15.66■□□□□ 0.1
SHMT2-221ENST00000555773 MEIS3Q99687 375 aa15.66■□□□□ 0.1
SHMT2-221ENST00000555773 ZBTB40Q9NUA8 1239 aa15.66■□□□□ 0.1
SHMT2-221ENST00000555773 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-221ENST00000555773 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-221ENST00000555773 GNAI2P04899 355 aa15.65■□□□□ 0.1
SHMT2-221ENST00000555773 ST5P78524 1137 aa15.65■□□□□ 0.1
SHMT2-221ENST00000555773 PLA2G12BQ9BX93 195 aa15.65■□□□□ 0.1
SHMT2-221ENST00000555773 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
SHMT2-221ENST00000555773 C4AP0C0L4 1744 aa15.64■□□□□ 0.09
SHMT2-221ENST00000555773 ERFEQ4G0M1 354 aa15.64■□□□□ 0.09
SHMT2-221ENST00000555773 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
SHMT2-221ENST00000555773 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
SHMT2-221ENST00000555773 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 ARFGEF2Q9Y6D5 1785 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 PDE8AO60658 829 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-221ENST00000555773 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-221ENST00000555773 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 NUTM1Q86Y26 1132 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 EXOC6Q8TAG9 804 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-221ENST00000555773 BRIP1Q9BX63 1249 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 NUP98P52948 1817 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 TUBGCP6Q96RT7 1819 aa15.63■□□□□ 0.09
SHMT2-221ENST00000555773 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
SHMT2-221ENST00000555773 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
SHMT2-221ENST00000555773 SGIP1Q9BQI5 828 aa15.62■□□□□ 0.09
SHMT2-221ENST00000555773 CSF1RP07333 972 aa15.61■□□□□ 0.09
SHMT2-221ENST00000555773 HCLS1P14317 486 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-221ENST00000555773 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
SHMT2-221ENST00000555773 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
SHMT2-221ENST00000555773 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
SHMT2-221ENST00000555773 KLRG2A4D1S0 409 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-221ENST00000555773 PTGER2P43116 358 aa15.6■□□□□ 0.09
SHMT2-221ENST00000555773 FOXO4P98177 505 aa15.6■□□□□ 0.09
SHMT2-221ENST00000555773 SF3B3Q15393 1217 aaKnown RBP15.6■□□□□ 0.09
SHMT2-221ENST00000555773 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-221ENST00000555773 RPAP2Q8IXW5 612 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-221ENST00000555773 PDE6BP35913 854 aa15.59■□□□□ 0.09
SHMT2-221ENST00000555773 ATP8B2P98198 1209 aa15.59■□□□□ 0.09
SHMT2-221ENST00000555773 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
SHMT2-221ENST00000555773 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
SHMT2-221ENST00000555773 RIC1Q4ADV7 1423 aa15.59■□□□□ 0.09
SHMT2-221ENST00000555773 CTSWP56202 376 aa15.58■□□□□ 0.08
SHMT2-221ENST00000555773 MTX1Q13505 466 aa15.58■□□□□ 0.08
SHMT2-221ENST00000555773 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
SHMT2-221ENST00000555773 EPHA10Q5JZY3 1008 aa15.58■□□□□ 0.08
SHMT2-221ENST00000555773 LMBR1LQ6UX01 489 aa15.58■□□□□ 0.08
SHMT2-221ENST00000555773 CCDC24Q8N4L8 307 aa15.58■□□□□ 0.08
SHMT2-221ENST00000555773 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
SHMT2-221ENST00000555773 ANKRD44Q8N8A2 993 aa15.57■□□□□ 0.08
SHMT2-221ENST00000555773 C1orf115Q9H7X2 142 aa15.57■□□□□ 0.08
SHMT2-221ENST00000555773 ABCC12Q96J65 1359 aa15.57■□□□□ 0.08
SHMT2-221ENST00000555773 CRY2Q49AN0 593 aa15.56■□□□□ 0.08
SHMT2-221ENST00000555773 CEP85Q6P2H3 762 aa15.56■□□□□ 0.08
SHMT2-221ENST00000555773 CD2APQ9Y5K6 639 aa15.56■□□□□ 0.08
SHMT2-221ENST00000555773 ANKRD36CQ5JPF3 1778 aa15.55■□□□□ 0.08
SHMT2-221ENST00000555773 H0YIN7 160 aa15.55■□□□□ 0.08
SHMT2-221ENST00000555773 HMMRO75330 724 aa15.55■□□□□ 0.08
SHMT2-221ENST00000555773 TGFB2P61812 414 aa15.55■□□□□ 0.08
SHMT2-221ENST00000555773 IFIT5Q13325 482 aaKnown RBP15.55■□□□□ 0.08
SHMT2-221ENST00000555773 CCDC57Q2TAC2 916 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms