RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
ACTN1-215ENST00000555616 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
ACTN1-215ENST00000555616 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
ACTN1-215ENST00000555616 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
ACTN1-215ENST00000555616 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
ACTN1-215ENST00000555616 NLRP10Q86W26 655 aa12.41□□□□□ -0.42
ACTN1-215ENST00000555616 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-215ENST00000555616 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
ACTN1-215ENST00000555616 SNED1Q8TER0 1413 aa12.4□□□□□ -0.42
ACTN1-215ENST00000555616 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-215ENST00000555616 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
ACTN1-215ENST00000555616 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
ACTN1-215ENST00000555616 UTP14AQ9BVJ6 771 aaKnown RBP12.4□□□□□ -0.42
ACTN1-215ENST00000555616 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
ACTN1-215ENST00000555616 SBF1O95248 1867 aa12.4□□□□□ -0.42
ACTN1-215ENST00000555616 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-215ENST00000555616 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 TAOK3Q9H2K8 898 aa12.39□□□□□ -0.43
ACTN1-215ENST00000555616 CACNA1SQ13698 1873 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 KIF3CO14782 793 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 ISCA1Q9BUE6 129 aa12.38□□□□□ -0.43
ACTN1-215ENST00000555616 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-215ENST00000555616 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
ACTN1-215ENST00000555616 E9PSI1 815 aa12.37□□□□□ -0.43
ACTN1-215ENST00000555616 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
ACTN1-215ENST00000555616 CRAMP1Q96RY5 1269 aa12.37□□□□□ -0.43
ACTN1-215ENST00000555616 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
ACTN1-215ENST00000555616 TRIM28Q13263 835 aaKnown RBP12.36□□□□□ -0.43
ACTN1-215ENST00000555616 TWISTNBQ3B726 338 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-215ENST00000555616 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
ACTN1-215ENST00000555616 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
ACTN1-215ENST00000555616 NMRK2Q9NPI5 230 aa12.36□□□□□ -0.43
ACTN1-215ENST00000555616 TRMT112Q9UI30 125 aaKnown RBP12.36□□□□□ -0.43
ACTN1-215ENST00000555616 LAMB2P55268 1798 aa12.35□□□□□ -0.43
ACTN1-215ENST00000555616 FKBP4Q02790 459 aaKnown RBP eCLIP12.35□□□□□ -0.43
ACTN1-215ENST00000555616 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
ACTN1-215ENST00000555616 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
ACTN1-215ENST00000555616 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
ACTN1-215ENST00000555616 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
ACTN1-215ENST00000555616 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
ACTN1-215ENST00000555616 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
ACTN1-215ENST00000555616 CEP350Q5VT06 3117 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 HSPA6P17066 643 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 PSMD1Q99460 953 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 ABCC4O15439 1325 aa12.34□□□□□ -0.43
ACTN1-215ENST00000555616 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
ACTN1-215ENST00000555616 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
ACTN1-215ENST00000555616 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-215ENST00000555616 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
ACTN1-215ENST00000555616 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-215ENST00000555616 SLFN5Q08AF3 891 aa12.33□□□□□ -0.44
ACTN1-215ENST00000555616 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
ACTN1-215ENST00000555616 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
ACTN1-215ENST00000555616 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-215ENST00000555616 LRRC37AA6NMS7 1700 aa12.32□□□□□ -0.44
ACTN1-215ENST00000555616 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
ACTN1-215ENST00000555616 TOMM70O94826 608 aa12.32□□□□□ -0.44
ACTN1-215ENST00000555616 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
ACTN1-215ENST00000555616 CDCA7LQ96GN5 454 aa12.32□□□□□ -0.44
ACTN1-215ENST00000555616 METTL22Q9BUU2 404 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-215ENST00000555616 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-215ENST00000555616 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
ACTN1-215ENST00000555616 KSR2Q6VAB6 950 aa12.31□□□□□ -0.44
ACTN1-215ENST00000555616 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
ACTN1-215ENST00000555616 ZBTB38Q8NAP3 1195 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-215ENST00000555616 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
ACTN1-215ENST00000555616 MYD88Q99836 296 aa12.31□□□□□ -0.44
ACTN1-215ENST00000555616 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
ACTN1-215ENST00000555616 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
ACTN1-215ENST00000555616 COL4A5P29400 1685 aa12.3□□□□□ -0.44
ACTN1-215ENST00000555616 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
ACTN1-215ENST00000555616 TCERG1O14776 1098 aaKnown RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 VAMP4O75379 141 aa12.3□□□□□ -0.44
ACTN1-215ENST00000555616 PCCAP05165 728 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 GRAPQ13588 217 aa12.3□□□□□ -0.44
ACTN1-215ENST00000555616 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
ACTN1-215ENST00000555616 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 ZNF428Q96B54 188 aa12.3□□□□□ -0.44
ACTN1-215ENST00000555616 CWC25Q9NXE8 425 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-215ENST00000555616 CCDC88AQ3V6T2 1871 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms