RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 H7C1W4 665 aa17.09■□□□□ 0.33
LINC00638-201ENST00000555578 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
LINC00638-201ENST00000555578 CERKQ8TCT0 537 aa17.09■□□□□ 0.33
LINC00638-201ENST00000555578 EAF2Q96CJ1 260 aaPredicted RBP17.09■□□□□ 0.33
LINC00638-201ENST00000555578 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.33
LINC00638-201ENST00000555578 FAM89AQ96GI7 184 aa17.08■□□□□ 0.33
LINC00638-201ENST00000555578 USP21Q9UK80 565 aa17.08■□□□□ 0.33
LINC00638-201ENST00000555578 HSPA1LP34931 641 aa17.08■□□□□ 0.32
LINC00638-201ENST00000555578 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
LINC00638-201ENST00000555578 FOXO4P98177 505 aa17.08■□□□□ 0.32
LINC00638-201ENST00000555578 BECN1Q14457 450 aa17.08■□□□□ 0.32
LINC00638-201ENST00000555578 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.32
LINC00638-201ENST00000555578 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
LINC00638-201ENST00000555578 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
LINC00638-201ENST00000555578 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
LINC00638-201ENST00000555578 IL25Q9H293 177 aa17.07■□□□□ 0.32
LINC00638-201ENST00000555578 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
LINC00638-201ENST00000555578 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
LINC00638-201ENST00000555578 USP26Q9BXU7 913 aa17.07■□□□□ 0.32
LINC00638-201ENST00000555578 LRP6O75581 1613 aa17.06■□□□□ 0.32
LINC00638-201ENST00000555578 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
LINC00638-201ENST00000555578 RABL6Q3YEC7 729 aaPredicted RBP17.06■□□□□ 0.32
LINC00638-201ENST00000555578 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
LINC00638-201ENST00000555578 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
LINC00638-201ENST00000555578 CD2BP2O95400 341 aaKnown RBP17.06■□□□□ 0.32
LINC00638-201ENST00000555578 ITPK1Q13572 414 aa17.06■□□□□ 0.32
LINC00638-201ENST00000555578 VPS72Q15906 364 aa17.06■□□□□ 0.32
LINC00638-201ENST00000555578 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.05■□□□□ 0.32
LINC00638-201ENST00000555578 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 CHMLP26374 656 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 SIK1P57059 783 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 TFCP2Q12800 502 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
LINC00638-201ENST00000555578 ERC2O15083 957 aa17.04■□□□□ 0.32
LINC00638-201ENST00000555578 MEX3CQ5U5Q3 659 aaKnown RBP17.04■□□□□ 0.32
LINC00638-201ENST00000555578 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
LINC00638-201ENST00000555578 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
LINC00638-201ENST00000555578 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
LINC00638-201ENST00000555578 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
LINC00638-201ENST00000555578 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
LINC00638-201ENST00000555578 GIGYF2Q6Y7W6 1299 aaKnown RBP17.03■□□□□ 0.32
LINC00638-201ENST00000555578 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
LINC00638-201ENST00000555578 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
LINC00638-201ENST00000555578 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
LINC00638-201ENST00000555578 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
LINC00638-201ENST00000555578 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
LINC00638-201ENST00000555578 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
LINC00638-201ENST00000555578 LRRC24Q50LG9 513 aa17.02■□□□□ 0.31
LINC00638-201ENST00000555578 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.31
LINC00638-201ENST00000555578 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.31
LINC00638-201ENST00000555578 PALLDQ8WX93 1383 aa17.02■□□□□ 0.31
LINC00638-201ENST00000555578 PUS3Q9BZE2 481 aaKnown RBP17.01■□□□□ 0.31
LINC00638-201ENST00000555578 TJP1Q07157 1748 aa17.01■□□□□ 0.31
LINC00638-201ENST00000555578 AOX1Q06278 1338 aa17.01■□□□□ 0.31
LINC00638-201ENST00000555578 GLRX3O76003 335 aaKnown RBP17.01■□□□□ 0.31
LINC00638-201ENST00000555578 REC8O95072 547 aa17■□□□□ 0.31
LINC00638-201ENST00000555578 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
LINC00638-201ENST00000555578 NLRP10Q86W26 655 aa17■□□□□ 0.31
LINC00638-201ENST00000555578 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
LINC00638-201ENST00000555578 TTC41PQ6P2S7 1318 aa17■□□□□ 0.31
LINC00638-201ENST00000555578 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
LINC00638-201ENST00000555578 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
LINC00638-201ENST00000555578 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
LINC00638-201ENST00000555578 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
LINC00638-201ENST00000555578 CNTROBQ8N137 903 aa16.99■□□□□ 0.31
LINC00638-201ENST00000555578 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
LINC00638-201ENST00000555578 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
LINC00638-201ENST00000555578 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
LINC00638-201ENST00000555578 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
LINC00638-201ENST00000555578 EIF5P55010 431 aaKnown RBP16.99■□□□□ 0.31
LINC00638-201ENST00000555578 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
LINC00638-201ENST00000555578 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
LINC00638-201ENST00000555578 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
LINC00638-201ENST00000555578 TIMM10P62072 90 aa16.98■□□□□ 0.31
LINC00638-201ENST00000555578 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
LINC00638-201ENST00000555578 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
LINC00638-201ENST00000555578 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
LINC00638-201ENST00000555578 AFF2P51816 1311 aa16.98■□□□□ 0.31
LINC00638-201ENST00000555578 UBN2Q6ZU65 1347 aa16.98■□□□□ 0.31
LINC00638-201ENST00000555578 AK9Q5TCS8 1911 aa16.98■□□□□ 0.31
LINC00638-201ENST00000555578 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
LINC00638-201ENST00000555578 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
LINC00638-201ENST00000555578 COL15A1P39059 1388 aa16.97■□□□□ 0.31
LINC00638-201ENST00000555578 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
LINC00638-201ENST00000555578 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
LINC00638-201ENST00000555578 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
LINC00638-201ENST00000555578 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
LINC00638-201ENST00000555578 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
LINC00638-201ENST00000555578 CHGBP05060 677 aa16.96■□□□□ 0.3
LINC00638-201ENST00000555578 LINC00116Q8NCU8 138 aa16.96■□□□□ 0.3
LINC00638-201ENST00000555578 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.3
LINC00638-201ENST00000555578 ANTXR1Q9H6X2 564 aa16.95■□□□□ 0.3
LINC00638-201ENST00000555578 NUP98P52948 1817 aa16.95■□□□□ 0.3
LINC00638-201ENST00000555578 GREM2Q9H772 168 aa16.95■□□□□ 0.3
LINC00638-201ENST00000555578 IRS4O14654 1257 aaPredicted RBP16.94■□□□□ 0.3
LINC00638-201ENST00000555578 EYA2O00167 538 aa16.94■□□□□ 0.3
LINC00638-201ENST00000555578 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms