RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 RGL2O15211 777 aa14.41□□□□□ -0.1
TDP1-212ENST00000555565 ALDH1B1P30837 517 aa14.41□□□□□ -0.1
TDP1-212ENST00000555565 CRY2Q49AN0 593 aa14.41□□□□□ -0.1
TDP1-212ENST00000555565 NBPF10Q6P3W6 841 aaKnown RBP14.41□□□□□ -0.1
TDP1-212ENST00000555565 NBPF15Q8N660 670 aa14.41□□□□□ -0.1
TDP1-212ENST00000555565 MCOLN1Q9GZU1 580 aa14.41□□□□□ -0.1
TDP1-212ENST00000555565 BTBD11A6QL63 1104 aa14.4□□□□□ -0.1
TDP1-212ENST00000555565 SLC51AQ86UW1 340 aa14.4□□□□□ -0.1
TDP1-212ENST00000555565 JDP2Q8WYK2 163 aa14.4□□□□□ -0.1
TDP1-212ENST00000555565 BEGAINQ9BUH8 593 aa14.4□□□□□ -0.1
TDP1-212ENST00000555565 NIP7Q9Y221 180 aaKnown RBP eCLIP14.4□□□□□ -0.1
TDP1-212ENST00000555565 GJA3Q9Y6H8 435 aa14.4□□□□□ -0.1
TDP1-212ENST00000555565 GRM1Q13255 1194 aa14.39□□□□□ -0.11
TDP1-212ENST00000555565 HLFQ16534 295 aa14.39□□□□□ -0.11
TDP1-212ENST00000555565 USP50Q70EL3 339 aaPredicted RBP14.39□□□□□ -0.11
TDP1-212ENST00000555565 MCM10Q7L590 875 aa14.39□□□□□ -0.11
TDP1-212ENST00000555565 NPM2Q86SE8 214 aaKnown RBP14.39□□□□□ -0.11
TDP1-212ENST00000555565 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
TDP1-212ENST00000555565 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
TDP1-212ENST00000555565 DCTN1Q14203 1278 aa14.38□□□□□ -0.11
TDP1-212ENST00000555565 PAXIP1Q6ZW49 1069 aaPredicted RBP14.38□□□□□ -0.11
TDP1-212ENST00000555565 RTF1Q92541 710 aaKnown RBP14.38□□□□□ -0.11
TDP1-212ENST00000555565 ZNF652Q9Y2D9 606 aa14.38□□□□□ -0.11
TDP1-212ENST00000555565 FAM177BA6PVY3 158 aa14.37□□□□□ -0.11
TDP1-212ENST00000555565 HOXA10P31260 410 aaPredicted RBP14.37□□□□□ -0.11
TDP1-212ENST00000555565 CC2D2BQ6DHV5 1058 aa14.37□□□□□ -0.11
TDP1-212ENST00000555565 ABCC12Q96J65 1359 aa14.36□□□□□ -0.11
TDP1-212ENST00000555565 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
TDP1-212ENST00000555565 SNRPA1P09661 255 aaKnown RBP14.36□□□□□ -0.11
TDP1-212ENST00000555565 LMOD1P29536 600 aaPredicted RBP14.36□□□□□ -0.11
TDP1-212ENST00000555565 HHIPL1Q96JK4 782 aa14.36□□□□□ -0.11
TDP1-212ENST00000555565 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
TDP1-212ENST00000555565 CA12O43570 354 aa14.35□□□□□ -0.11
TDP1-212ENST00000555565 BRPF1P55201 1214 aaPredicted RBP14.35□□□□□ -0.11
TDP1-212ENST00000555565 ZIC5Q96T25 663 aa14.35□□□□□ -0.11
TDP1-212ENST00000555565 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
TDP1-212ENST00000555565 TRPM7Q96QT4 1865 aa14.35□□□□□ -0.11
TDP1-212ENST00000555565 DLG5Q8TDM6 1919 aa14.35□□□□□ -0.11
TDP1-212ENST00000555565 CASP8AP2Q9UKL3 1982 aa14.34□□□□□ -0.11
TDP1-212ENST00000555565 NUTM1Q86Y26 1132 aa14.34□□□□□ -0.11
TDP1-212ENST00000555565 LARGE2Q8N3Y3 721 aa14.34□□□□□ -0.11
TDP1-212ENST00000555565 PLEKHF1Q96S99 279 aa14.34□□□□□ -0.11
TDP1-212ENST00000555565 CELF2O95319 508 aaKnown RBP14.33□□□□□ -0.12
TDP1-212ENST00000555565 DGKZQ13574 1117 aa14.33□□□□□ -0.12
TDP1-212ENST00000555565 TAF7Q15545 349 aaPredicted RBP14.33□□□□□ -0.12
TDP1-212ENST00000555565 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.12
TDP1-212ENST00000555565 CIAPIN1Q6FI81 312 aa14.33□□□□□ -0.12
TDP1-212ENST00000555565 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
TDP1-212ENST00000555565 GLIS2Q9BZE0 524 aaPredicted RBP14.33□□□□□ -0.12
TDP1-212ENST00000555565 ADARB2Q9NS39 739 aaKnown RBP14.33□□□□□ -0.12
TDP1-212ENST00000555565 HIRAP54198 1017 aaPredicted RBP14.32□□□□□ -0.12
TDP1-212ENST00000555565 CXCL9Q07325 125 aa14.32□□□□□ -0.12
TDP1-212ENST00000555565 MIS18AQ9NYP9 233 aa14.32□□□□□ -0.12
TDP1-212ENST00000555565 RIC1Q4ADV7 1423 aa14.32□□□□□ -0.12
TDP1-212ENST00000555565 NEFMP07197 916 aa14.31□□□□□ -0.12
TDP1-212ENST00000555565 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
TDP1-212ENST00000555565 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
TDP1-212ENST00000555565 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
TDP1-212ENST00000555565 PDE4DIPQ5VU43 2346 aa14.31□□□□□ -0.12
TDP1-212ENST00000555565 ERVV-1B6SEH8 477 aa14.3□□□□□ -0.12
TDP1-212ENST00000555565 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
TDP1-212ENST00000555565 NIM1KQ8IY84 436 aa14.3□□□□□ -0.12
TDP1-212ENST00000555565 NYXQ9GZU5 481 aa14.3□□□□□ -0.12
TDP1-212ENST00000555565 UBN2Q6ZU65 1347 aa14.3□□□□□ -0.12
TDP1-212ENST00000555565 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
TDP1-212ENST00000555565 AOC3Q16853 763 aa14.29□□□□□ -0.12
TDP1-212ENST00000555565 SUSD4Q5VX71 490 aa14.29□□□□□ -0.12
TDP1-212ENST00000555565 DLK2Q6UY11 383 aa14.29□□□□□ -0.12
TDP1-212ENST00000555565 ZC3H15Q8WU90 426 aaKnown RBP14.29□□□□□ -0.12
TDP1-212ENST00000555565 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
TDP1-212ENST00000555565 FAM155AB1AL88 458 aaPredicted RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 TCERG1O14776 1098 aaKnown RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
TDP1-212ENST00000555565 DDX10Q13206 875 aaKnown RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 RALBP1Q15311 655 aa14.28□□□□□ -0.12
TDP1-212ENST00000555565 TTLL7Q6ZT98 887 aa14.28□□□□□ -0.12
TDP1-212ENST00000555565 KDM3BQ7LBC6 1761 aa14.28□□□□□ -0.12
TDP1-212ENST00000555565 RPGRQ92834 1020 aaKnown RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 THUMPD2Q9BTF0 503 aaKnown RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
TDP1-212ENST00000555565 ZNRF3Q9ULT6 936 aa14.28□□□□□ -0.12
TDP1-212ENST00000555565 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.12
TDP1-212ENST00000555565 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.12
TDP1-212ENST00000555565 SHTN1A0MZ66 631 aa14.27□□□□□ -0.13
TDP1-212ENST00000555565 NOGQ13253 232 aa14.27□□□□□ -0.13
TDP1-212ENST00000555565 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.13
TDP1-212ENST00000555565 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
TDP1-212ENST00000555565 PNISRQ8TF01 805 aaKnown RBP14.27□□□□□ -0.13
TDP1-212ENST00000555565 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
TDP1-212ENST00000555565 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
TDP1-212ENST00000555565 ATP6V0A2Q9Y487 856 aa14.27□□□□□ -0.13
TDP1-212ENST00000555565 LAMB4A4D0S4 1761 aa14.27□□□□□ -0.13
TDP1-212ENST00000555565 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
TDP1-212ENST00000555565 NTSR2O95665 410 aa14.26□□□□□ -0.13
TDP1-212ENST00000555565 CDC37L1Q7L3B6 337 aa14.26□□□□□ -0.13
TDP1-212ENST00000555565 GPTP24298 496 aa14.25□□□□□ -0.13
TDP1-212ENST00000555565 SOX10P56693 466 aa14.25□□□□□ -0.13
TDP1-212ENST00000555565 EIF4A1P60842 406 aaKnown RBP14.25□□□□□ -0.13
TDP1-212ENST00000555565 SLC10A5Q5PT55 438 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms