RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 HIF1AQ16665 826 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 XKR5Q6UX68 686 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 Q6ZVU0 165 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 RHBDD1Q8TEB9 315 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 C7orf43Q8WVR3 580 aa9.9□□□□□ -0.82
PAX3-210ENST00000555548 TGFBR3LH3BV60 316 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 TNFRSF21O75509 655 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 FGRP09769 529 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 CBLBQ13191 982 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
PAX3-210ENST00000555548 PMFBP1Q8TBY8 1022 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 MRGPRX2Q96LB1 330 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 PIF1Q9H611 641 aa9.89□□□□□ -0.83
PAX3-210ENST00000555548 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.89□□□□□ -0.83
PAX3-210ENST00000555548 USPL1Q5W0Q7 1092 aa9.88□□□□□ -0.83
PAX3-210ENST00000555548 TMEM214Q6NUQ4 689 aaKnown RBP9.88□□□□□ -0.83
PAX3-210ENST00000555548 PI16Q6UXB8 463 aa9.88□□□□□ -0.83
PAX3-210ENST00000555548 LIAT1Q6ZQX7 453 aa9.88□□□□□ -0.83
PAX3-210ENST00000555548 ZNF662Q6ZS27 426 aa9.88□□□□□ -0.83
PAX3-210ENST00000555548 EPS8L3Q8TE67 593 aaKnown RBP9.88□□□□□ -0.83
PAX3-210ENST00000555548 FAM8A1Q9UBU6 413 aa9.88□□□□□ -0.83
PAX3-210ENST00000555548 TBX22Q9Y458 520 aa9.88□□□□□ -0.83
PAX3-210ENST00000555548 STK10O94804 968 aaKnown RBP9.87□□□□□ -0.83
PAX3-210ENST00000555548 GTF2E1P29083 439 aaPredicted RBP9.87□□□□□ -0.83
PAX3-210ENST00000555548 IRS1P35568 1242 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 NNTQ13423 1086 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 MEI1Q5TIA1 1274 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 IER5Q5VY09 327 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 ERMP1Q7Z2K6 904 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 SNX29Q8TEQ0 813 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 ZSWIM4Q9H7M6 989 aa9.87□□□□□ -0.83
PAX3-210ENST00000555548 DMGDHQ9UI17 866 aaKnown RBP9.87□□□□□ -0.83
PAX3-210ENST00000555548 FOXD3Q9UJU5 478 aaPredicted RBP9.87□□□□□ -0.83
PAX3-210ENST00000555548 ATF4P18848 351 aaPredicted RBP9.86□□□□□ -0.83
PAX3-210ENST00000555548 SDE2Q6IQ49 451 aa9.86□□□□□ -0.83
PAX3-210ENST00000555548 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
PAX3-210ENST00000555548 SRCIN1Q9C0H9 1055 aa9.86□□□□□ -0.83
PAX3-210ENST00000555548 OSBPL2Q9H1P3 480 aa9.86□□□□□ -0.83
PAX3-210ENST00000555548 ZFYVE28Q9HCC9 887 aa9.86□□□□□ -0.83
PAX3-210ENST00000555548 GPC6Q9Y625 555 aaPredicted RBP9.86□□□□□ -0.83
PAX3-210ENST00000555548 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
PAX3-210ENST00000555548 PAK2Q13177 524 aa9.85□□□□□ -0.83
PAX3-210ENST00000555548 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
PAX3-210ENST00000555548 AGBL1Q96MI9 1066 aa9.85□□□□□ -0.83
PAX3-210ENST00000555548 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.83
PAX3-210ENST00000555548 FNDC3AQ9Y2H6 1198 aaKnown RBP9.85□□□□□ -0.83
PAX3-210ENST00000555548 V9GY48 417 aaPredicted RBP9.85□□□□□ -0.83
PAX3-210ENST00000555548 GNASQ5JWF2 1037 aa9.84□□□□□ -0.83
PAX3-210ENST00000555548 EMID1Q96A84 441 aaPredicted RBP9.84□□□□□ -0.83
PAX3-210ENST00000555548 GPRASP2Q96D09 838 aa9.84□□□□□ -0.83
PAX3-210ENST00000555548 SUSD3Q96L08 255 aa9.84□□□□□ -0.83
PAX3-210ENST00000555548 KLF16Q9BXK1 252 aaPredicted RBP9.84□□□□□ -0.83
PAX3-210ENST00000555548 GRIP2Q9C0E4 1043 aa9.84□□□□□ -0.83
PAX3-210ENST00000555548 ZDHHC3Q9NYG2 299 aa9.84□□□□□ -0.83
PAX3-210ENST00000555548 POTECB2RU33 542 aa9.83□□□□□ -0.84
PAX3-210ENST00000555548 GPC1P35052 558 aa9.83□□□□□ -0.84
PAX3-210ENST00000555548 PLA2G4AP47712 749 aa9.83□□□□□ -0.84
PAX3-210ENST00000555548 IDH3AP50213 366 aa9.83□□□□□ -0.84
PAX3-210ENST00000555548 ZNF746Q6NUN9 644 aaPredicted RBP9.83□□□□□ -0.84
PAX3-210ENST00000555548 ZNF438Q7Z4V0 828 aa9.83□□□□□ -0.84
PAX3-210ENST00000555548 ALDH1A1P00352 501 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 INPP5BP32019 993 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 ARSDP51689 593 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 RELBQ01201 579 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 C4orf17Q53FE4 359 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 EGFLAMQ63HQ2 1017 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 ZNF280CQ8ND82 737 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 RASGRP4Q8TDF6 673 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
PAX3-210ENST00000555548 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
PAX3-210ENST00000555548 SBNO2Q9Y2G9 1366 aa9.81□□□□□ -0.84
PAX3-210ENST00000555548 PHACTR2O75167 634 aa9.81□□□□□ -0.84
PAX3-210ENST00000555548 TRIP4Q15650 581 aaPredicted RBP9.81□□□□□ -0.84
PAX3-210ENST00000555548 NXPE4Q6UWF7 544 aa9.81□□□□□ -0.84
PAX3-210ENST00000555548 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
PAX3-210ENST00000555548 COPRSQ9NQ92 184 aa9.81□□□□□ -0.84
PAX3-210ENST00000555548 RTCBQ9Y3I0 505 aaKnown RBP9.81□□□□□ -0.84
PAX3-210ENST00000555548 UBAP1LF5GYI3 381 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 ZIC2O95409 532 aaPredicted RBP9.8□□□□□ -0.84
PAX3-210ENST00000555548 NBPF10Q6P3W6 841 aaKnown RBP9.8□□□□□ -0.84
PAX3-210ENST00000555548 KLRG1Q96E93 195 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 BCO2Q9BYV7 579 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 ZNF395Q9H8N7 513 aaPredicted RBP9.8□□□□□ -0.84
PAX3-210ENST00000555548 ELP3Q9H9T3 547 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 NPHS2Q9NP85 383 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 ANKIB1Q9P2G1 1089 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 KCNMB2Q9Y691 235 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 WASF2Q9Y6W5 498 aa9.8□□□□□ -0.84
PAX3-210ENST00000555548 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
PAX3-210ENST00000555548 GALNT12Q8IXK2 581 aa9.79□□□□□ -0.84
PAX3-210ENST00000555548 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
PAX3-210ENST00000555548 HSH2DQ96JZ2 352 aa9.79□□□□□ -0.84
PAX3-210ENST00000555548 NOC4LQ9BVI4 516 aaKnown RBP9.79□□□□□ -0.84
PAX3-210ENST00000555548 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.79□□□□□ -0.84
PAX3-210ENST00000555548 USP20Q9Y2K6 914 aa9.79□□□□□ -0.84
PAX3-210ENST00000555548 TATP17735 454 aaPredicted RBP9.78□□□□□ -0.84
PAX3-210ENST00000555548 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
PAX3-210ENST00000555548 BMS1Q14692 1282 aaKnown RBP9.78□□□□□ -0.84
PAX3-210ENST00000555548 NFE2L2Q16236 605 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms