RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 LZTS3O60299 673 aaPredicted RBP8.85□□□□□ -0.99
SNX6-204ENST00000555541 BHMTQ93088 406 aa8.85□□□□□ -0.99
SNX6-204ENST00000555541 SUSD3Q96L08 255 aa8.85□□□□□ -0.99
SNX6-204ENST00000555541 SFI1A8K8P3 1242 aa8.84□□□□□ -0.99
SNX6-204ENST00000555541 NCOA4Q13772 614 aa8.84□□□□□ -0.99
SNX6-204ENST00000555541 GRIK5Q16478 980 aa8.84□□□□□ -0.99
SNX6-204ENST00000555541 NUDT8Q8WV74 236 aa8.84□□□□□ -0.99
SNX6-204ENST00000555541 NOS3P29474 1203 aa8.83□□□□□ -1
SNX6-204ENST00000555541 DMRTC2Q8IXT2 367 aaPredicted RBP8.83□□□□□ -1
SNX6-204ENST00000555541 WFDC12Q8WWY7 111 aa8.83□□□□□ -1
SNX6-204ENST00000555541 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
SNX6-204ENST00000555541 PHACTR1Q9C0D0 580 aa8.83□□□□□ -1
SNX6-204ENST00000555541 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
SNX6-204ENST00000555541 PSMA6P60900 246 aaKnown RBP8.82□□□□□ -1
SNX6-204ENST00000555541 PSAPL1Q6NUJ1 521 aa8.82□□□□□ -1
SNX6-204ENST00000555541 GSX2Q9BZM3 304 aa8.82□□□□□ -1
SNX6-204ENST00000555541 UBE2OQ9C0C9 1292 aaKnown RBP8.82□□□□□ -1
SNX6-204ENST00000555541 TSPAN10Q9H1Z9 355 aaPredicted RBP8.82□□□□□ -1
SNX6-204ENST00000555541 EFCC1Q9HA90 598 aa8.82□□□□□ -1
SNX6-204ENST00000555541 DNAJB12Q9NXW2 375 aaKnown RBP8.82□□□□□ -1
SNX6-204ENST00000555541 USP21Q9UK80 565 aa8.82□□□□□ -1
SNX6-204ENST00000555541 KIAA1024Q9UPX6 916 aa8.82□□□□□ -1
SNX6-204ENST00000555541 HCN4Q9Y3Q4 1203 aa8.82□□□□□ -1
SNX6-204ENST00000555541 POM121CA8CG34 1229 aa8.81□□□□□ -1
SNX6-204ENST00000555541 FBXO11Q86XK2 927 aa8.81□□□□□ -1
SNX6-204ENST00000555541 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
SNX6-204ENST00000555541 DTWD1Q8N5C7 304 aa8.81□□□□□ -1
SNX6-204ENST00000555541 MEGF10Q96KG7 1140 aa8.81□□□□□ -1
SNX6-204ENST00000555541 USP17L5A8MUK1 530 aa8.8□□□□□ -1
SNX6-204ENST00000555541 C21orf2O43822 256 aa8.79□□□□□ -1
SNX6-204ENST00000555541 GRNP28799 593 aaKnown RBP8.79□□□□□ -1
SNX6-204ENST00000555541 IREB2P48200 963 aaKnown RBP8.79□□□□□ -1
SNX6-204ENST00000555541 MSL1Q68DK7 614 aa8.79□□□□□ -1
SNX6-204ENST00000555541 PRR23CQ6ZRP0 262 aa8.79□□□□□ -1
SNX6-204ENST00000555541 BTLAQ7Z6A9 289 aa8.79□□□□□ -1
SNX6-204ENST00000555541 UCN2Q96RP3 112 aa8.79□□□□□ -1
SNX6-204ENST00000555541 KRTAP4-7Q9BYR0 210 aa8.79□□□□□ -1
SNX6-204ENST00000555541 DKK1O94907 266 aa8.78□□□□□ -1
SNX6-204ENST00000555541 PLAURQ03405 335 aa8.78□□□□□ -1
SNX6-204ENST00000555541 PSME1Q06323 249 aa8.78□□□□□ -1
SNX6-204ENST00000555541 CLDN10P78369 228 aa8.77□□□□□ -1.01
SNX6-204ENST00000555541 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
SNX6-204ENST00000555541 LCE1DQ5T752 114 aa8.77□□□□□ -1.01
SNX6-204ENST00000555541 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
SNX6-204ENST00000555541 DZIP1LQ8IYY4 767 aaKnown RBP8.77□□□□□ -1.01
SNX6-204ENST00000555541 LPIN3Q9BQK8 851 aa8.77□□□□□ -1.01
SNX6-204ENST00000555541 M0R2N6 131 aa8.76□□□□□ -1.01
SNX6-204ENST00000555541 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
SNX6-204ENST00000555541 RGS9O75916 674 aaPredicted RBP8.76□□□□□ -1.01
SNX6-204ENST00000555541 CD97P48960 835 aa8.76□□□□□ -1.01
SNX6-204ENST00000555541 TPCN2Q8NHX9 752 aa8.76□□□□□ -1.01
SNX6-204ENST00000555541 DMGDHQ9UI17 866 aaKnown RBP8.76□□□□□ -1.01
SNX6-204ENST00000555541 IGF2-ASQ6U949 168 aa8.75□□□□□ -1.01
SNX6-204ENST00000555541 IGFLR1Q9H665 355 aa8.75□□□□□ -1.01
SNX6-204ENST00000555541 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 SLC51AQ86UW1 340 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 ALDH16A1Q8IZ83 802 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 FRRS1LQ9P0K9 344 aa8.74□□□□□ -1.01
SNX6-204ENST00000555541 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.74□□□□□ -1.01
SNX6-204ENST00000555541 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 DLL1O00548 723 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 IER5Q5VY09 327 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 USP17L2Q6R6M4 530 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 TTC9Q92623 222 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
SNX6-204ENST00000555541 BCS1LQ9Y276 419 aa8.73□□□□□ -1.01
SNX6-204ENST00000555541 MAP3K6O95382 1288 aa8.72□□□□□ -1.01
SNX6-204ENST00000555541 NFKB1P19838 968 aa8.72□□□□□ -1.01
SNX6-204ENST00000555541 FSTP19883 344 aa8.72□□□□□ -1.01
SNX6-204ENST00000555541 CCINQ13939 588 aa8.72□□□□□ -1.01
SNX6-204ENST00000555541 PERM1Q5SV97 790 aa8.72□□□□□ -1.01
SNX6-204ENST00000555541 PCMTD2Q9NV79 361 aa8.72□□□□□ -1.01
SNX6-204ENST00000555541 PAX4O43316 350 aa8.71□□□□□ -1.02
SNX6-204ENST00000555541 ATP9BO43861 1147 aa8.71□□□□□ -1.02
SNX6-204ENST00000555541 MED26O95402 600 aa8.71□□□□□ -1.02
SNX6-204ENST00000555541 TRIM50Q86XT4 487 aa8.71□□□□□ -1.02
SNX6-204ENST00000555541 TRPM4Q8TD43 1214 aa8.71□□□□□ -1.02
SNX6-204ENST00000555541 ZFATQ9P243 1243 aa8.71□□□□□ -1.02
SNX6-204ENST00000555541 TXKP42681 527 aa8.7□□□□□ -1.02
SNX6-204ENST00000555541 FLIIQ13045 1269 aa8.7□□□□□ -1.02
SNX6-204ENST00000555541 FAM35AQ86V20 835 aa8.7□□□□□ -1.02
SNX6-204ENST00000555541 WWC1Q8IX03 1113 aa8.7□□□□□ -1.02
SNX6-204ENST00000555541 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
SNX6-204ENST00000555541 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
SNX6-204ENST00000555541 TSEN2Q8NCE0 465 aaKnown RBP8.7□□□□□ -1.02
SNX6-204ENST00000555541 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
SNX6-204ENST00000555541 RAD21O60216 631 aa8.69□□□□□ -1.02
SNX6-204ENST00000555541 CPB1P15086 417 aa8.69□□□□□ -1.02
SNX6-204ENST00000555541 SSTR4P31391 388 aa8.69□□□□□ -1.02
SNX6-204ENST00000555541 Q6ZS46 218 aa8.69□□□□□ -1.02
SNX6-204ENST00000555541 SIX5Q8N196 739 aa8.69□□□□□ -1.02
SNX6-204ENST00000555541 FNBP4Q8N3X1 1017 aaPredicted RBP8.69□□□□□ -1.02
SNX6-204ENST00000555541 MKRN1Q9UHC7 482 aaKnown RBP8.69□□□□□ -1.02
SNX6-204ENST00000555541 ARID1BQ8NFD5 2236 aaPredicted RBP8.68□□□□□ -1.02
SNX6-204ENST00000555541 PPP1R12BO60237 982 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms