RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 ZNF827Q17R98 1081 aa14.54□□□□□ -0.08
APEX1-210ENST00000555414 UTP14AQ9BVJ6 771 aaKnown RBP14.54□□□□□ -0.08
APEX1-210ENST00000555414 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
APEX1-210ENST00000555414 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
APEX1-210ENST00000555414 ARFGEF2Q9Y6D5 1785 aa14.54□□□□□ -0.08
APEX1-210ENST00000555414 UBE3BQ7Z3V4 1068 aa14.53□□□□□ -0.08
APEX1-210ENST00000555414 NLGN1Q8N2Q7 840 aa14.53□□□□□ -0.08
APEX1-210ENST00000555414 SRP68Q9UHB9 627 aaKnown RBP14.53□□□□□ -0.08
APEX1-210ENST00000555414 LRRFIP2Q9Y608 721 aaKnown RBP14.53□□□□□ -0.08
APEX1-210ENST00000555414 GTF2E1P29083 439 aaPredicted RBP14.52□□□□□ -0.08
APEX1-210ENST00000555414 N4BP2Q86UW6 1770 aaPredicted RBP14.52□□□□□ -0.09
APEX1-210ENST00000555414 NUP188Q5SRE5 1749 aa14.52□□□□□ -0.09
APEX1-210ENST00000555414 NPHP1O15259 732 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 HDAC1Q13547 482 aaPredicted RBP14.51□□□□□ -0.09
APEX1-210ENST00000555414 TPTE2Q6XPS3 522 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 SMIM5Q71RC9 77 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 COL23A1Q86Y22 540 aaPredicted RBP14.51□□□□□ -0.09
APEX1-210ENST00000555414 ANKRD44Q8N8A2 993 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 C1orf115Q9H7X2 142 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 BCL2L12Q9HB09 334 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 PCDHB15Q9Y5E8 787 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
APEX1-210ENST00000555414 ATP8B2P98198 1209 aa14.5□□□□□ -0.09
APEX1-210ENST00000555414 TBC1D9BQ66K14 1250 aa14.5□□□□□ -0.09
APEX1-210ENST00000555414 B4GALNT3Q6L9W6 998 aa14.5□□□□□ -0.09
APEX1-210ENST00000555414 BICDL1Q6ZP65 573 aa14.5□□□□□ -0.09
APEX1-210ENST00000555414 NBPF5PQ86XG9 351 aaPredicted RBP14.5□□□□□ -0.09
APEX1-210ENST00000555414 PNPLA7Q6ZV29 1317 aa14.5□□□□□ -0.09
APEX1-210ENST00000555414 CDHR2Q9BYE9 1310 aa14.5□□□□□ -0.09
APEX1-210ENST00000555414 GYS1P13807 737 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 CEP85Q6P2H3 762 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 CENPQQ7L2Z9 268 aaPredicted RBP14.49□□□□□ -0.09
APEX1-210ENST00000555414 FAM89AQ96GI7 184 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 UBN2Q6ZU65 1347 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 UBR3Q6ZT12 1888 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 CARMIL3Q8ND23 1372 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
APEX1-210ENST00000555414 NUP98P52948 1817 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 FAM177BA6PVY3 158 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 IRS4O14654 1257 aaPredicted RBP14.48□□□□□ -0.09
APEX1-210ENST00000555414 SRGAP3O43295 1099 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 CASP7P55210 303 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 MTX1Q13505 466 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 NFIXQ14938 502 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
APEX1-210ENST00000555414 SLC16A10Q8TF71 515 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 PLA2G12BQ9BX93 195 aa14.48□□□□□ -0.09
APEX1-210ENST00000555414 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
APEX1-210ENST00000555414 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
APEX1-210ENST00000555414 ZBTB47Q9UFB7 747 aaPredicted RBP14.48□□□□□ -0.09
APEX1-210ENST00000555414 EP400Q96L91 3159 aa14.47□□□□□ -0.09
APEX1-210ENST00000555414 PDE8AO60658 829 aa14.47□□□□□ -0.09
APEX1-210ENST00000555414 JARID2Q92833 1246 aaPredicted RBP14.47□□□□□ -0.09
APEX1-210ENST00000555414 GCC1Q96CN9 775 aa14.47□□□□□ -0.09
APEX1-210ENST00000555414 BCORQ6W2J9 1755 aa14.47□□□□□ -0.09
APEX1-210ENST00000555414 SCN7AQ01118 1682 aa14.47□□□□□ -0.09
APEX1-210ENST00000555414 AFDNP55196 1824 aaKnown RBP14.46□□□□□ -0.09
APEX1-210ENST00000555414 NTSR2O95665 410 aa14.46□□□□□ -0.09
APEX1-210ENST00000555414 TM4SF1P30408 202 aa14.46□□□□□ -0.09
APEX1-210ENST00000555414 RABL6Q3YEC7 729 aaPredicted RBP14.46□□□□□ -0.09
APEX1-210ENST00000555414 HSP90AB4PQ58FF6 505 aa14.46□□□□□ -0.09
APEX1-210ENST00000555414 ANKRD36CQ5JPF3 1778 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 ST5P78524 1137 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 FOXO4P98177 505 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 SLC10A5Q5PT55 438 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 LMBR1LQ6UX01 489 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 SSH3Q8TE77 659 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 CHMP3Q9Y3E7 222 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
APEX1-210ENST00000555414 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 IGHDP01880 384 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 SERPINB2P05120 415 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 CTSWP56202 376 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 CCDC57Q2TAC2 916 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 SIRT2Q8IXJ6 389 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 KAZALD1Q96I82 304 aa14.44□□□□□ -0.1
APEX1-210ENST00000555414 POLA2Q14181 598 aa14.43□□□□□ -0.1
APEX1-210ENST00000555414 ERFEQ4G0M1 354 aa14.43□□□□□ -0.1
APEX1-210ENST00000555414 CCDC152Q4G0S7 254 aa14.43□□□□□ -0.1
APEX1-210ENST00000555414 NUTM1Q86Y26 1132 aa14.43□□□□□ -0.1
APEX1-210ENST00000555414 NLRP3Q96P20 1036 aa14.43□□□□□ -0.1
APEX1-210ENST00000555414 DCTPP1Q9H773 170 aa14.43□□□□□ -0.1
APEX1-210ENST00000555414 PNMA6EA0A0J9YXQ4 647 aa14.42□□□□□ -0.1
APEX1-210ENST00000555414 CSF1RP07333 972 aa14.42□□□□□ -0.1
APEX1-210ENST00000555414 HCLS1P14317 486 aaPredicted RBP14.42□□□□□ -0.1
APEX1-210ENST00000555414 IFIT5Q13325 482 aaKnown RBP14.42□□□□□ -0.1
APEX1-210ENST00000555414 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
APEX1-210ENST00000555414 ILDR2Q71H61 639 aa14.42□□□□□ -0.1
APEX1-210ENST00000555414 POLRMTO00411 1230 aaKnown RBP14.41□□□□□ -0.1
APEX1-210ENST00000555414 RAB11FIP3O75154 756 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 SURF6O75683 361 aaKnown RBP14.41□□□□□ -0.1
APEX1-210ENST00000555414 MMP10P09238 476 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 G3BP1Q13283 466 aaKnown RBP eCLIP14.41□□□□□ -0.11e-8■■■□□ 18.5
APEX1-210ENST00000555414 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
APEX1-210ENST00000555414 EPHA10Q5JZY3 1008 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 ERC1Q8IUD2 1116 aa14.41□□□□□ -0.1
APEX1-210ENST00000555414 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms