RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 C7orf43Q8WVR3 580 aa14.11□□□□□ -0.15
SRP54-205ENST00000554803 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
SRP54-205ENST00000554803 CT47B1P0C2W7 299 aaPredicted RBP14.1□□□□□ -0.15
SRP54-205ENST00000554803 U2AF1L5P0DN76 240 aaPredicted RBP14.1□□□□□ -0.15
SRP54-205ENST00000554803 SRGNP10124 158 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 U2AF1Q01081 240 aaKnown RBP eCLIP14.1□□□□□ -0.15
SRP54-205ENST00000554803 GRM1Q13255 1194 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 DGKZQ13574 1117 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 CCDC27Q2M243 656 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 CCDC146Q8IYE0 955 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 MASTLQ96GX5 879 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
SRP54-205ENST00000554803 AOC2O75106 756 aa14.09□□□□□ -0.15
SRP54-205ENST00000554803 EIF5P55010 431 aaKnown RBP14.09□□□□□ -0.15
SRP54-205ENST00000554803 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRP54-205ENST00000554803 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
SRP54-205ENST00000554803 A0A087WZG4 1122 aa14.08□□□□□ -0.16
SRP54-205ENST00000554803 FZD9O00144 591 aa14.08□□□□□ -0.16
SRP54-205ENST00000554803 HMOX1P09601 288 aa14.08□□□□□ -0.16
SRP54-205ENST00000554803 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
SRP54-205ENST00000554803 FMR1Q06787 632 aaKnown RBP eCLIP14.08□□□□□ -0.162e-7■□□□□ 8.6
SRP54-205ENST00000554803 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
SRP54-205ENST00000554803 GPC2Q8N158 579 aa14.08□□□□□ -0.16
SRP54-205ENST00000554803 ZNF277Q9NRM2 450 aaPredicted RBP14.08□□□□□ -0.16
SRP54-205ENST00000554803 SALL2Q9Y467 1007 aaPredicted RBP14.08□□□□□ -0.16
SRP54-205ENST00000554803 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
SRP54-205ENST00000554803 NBR1Q14596 966 aa14.07□□□□□ -0.16
SRP54-205ENST00000554803 CST9Q5W186 159 aa14.07□□□□□ -0.16
SRP54-205ENST00000554803 AEBP1Q8IUX7 1158 aa14.07□□□□□ -0.16
SRP54-205ENST00000554803 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
SRP54-205ENST00000554803 CNBD1Q8NA66 436 aa14.07□□□□□ -0.16
SRP54-205ENST00000554803 AKAP11Q9UKA4 1901 aa14.06□□□□□ -0.16
SRP54-205ENST00000554803 BRPF1P55201 1214 aaPredicted RBP14.06□□□□□ -0.16
SRP54-205ENST00000554803 ST5P78524 1137 aa14.06□□□□□ -0.16
SRP54-205ENST00000554803 RSPH6AQ9H0K4 717 aa14.06□□□□□ -0.16
SRP54-205ENST00000554803 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
SRP54-205ENST00000554803 PLIN1O60240 522 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 NEFMP07197 916 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 IARSP41252 1262 aaKnown RBP14.04□□□□□ -0.16
SRP54-205ENST00000554803 SOX10P56693 466 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 SULT6B1Q6IMI4 303 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 PLEKHF1Q96S99 279 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 LGR6Q9HBX8 967 aa14.04□□□□□ -0.16
SRP54-205ENST00000554803 TRAF5O00463 557 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 NPHP1O15259 732 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 STARD3NLO95772 234 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 NPM2Q86SE8 214 aaKnown RBP14.03□□□□□ -0.16
SRP54-205ENST00000554803 SAPCD2Q86UD0 394 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 RTKN2Q8IZC4 609 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 HHIPL1Q96JK4 782 aa14.03□□□□□ -0.16
SRP54-205ENST00000554803 SIPA1L3O60292 1781 aaPredicted RBP14.03□□□□□ -0.16
SRP54-205ENST00000554803 COL4A5P29400 1685 aa14.02□□□□□ -0.16
SRP54-205ENST00000554803 SNED1Q8TER0 1413 aa14.02□□□□□ -0.16
SRP54-205ENST00000554803 RNMTO43148 476 aaKnown RBP14.02□□□□□ -0.17
SRP54-205ENST00000554803 NPR1P16066 1061 aa14.02□□□□□ -0.17
SRP54-205ENST00000554803 LMOD1P29536 600 aaPredicted RBP14.02□□□□□ -0.17
SRP54-205ENST00000554803 OLFM4Q6UX06 510 aa14.02□□□□□ -0.17
SRP54-205ENST00000554803 TBC1D2BQ9UPU7 963 aa14.02□□□□□ -0.17
SRP54-205ENST00000554803 APAF1O14727 1248 aa14.01□□□□□ -0.17
SRP54-205ENST00000554803 EPS15P42566 896 aa14.01□□□□□ -0.17
SRP54-205ENST00000554803 SCNN1DP51172 638 aa14.01□□□□□ -0.17
SRP54-205ENST00000554803 USP50Q70EL3 339 aaPredicted RBP14.01□□□□□ -0.17
SRP54-205ENST00000554803 SYNE4Q8N205 404 aa14.01□□□□□ -0.17
SRP54-205ENST00000554803 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
SRP54-205ENST00000554803 KLRG2A4D1S0 409 aaPredicted RBP14□□□□□ -0.17
SRP54-205ENST00000554803 CAMTA2O94983 1202 aa14□□□□□ -0.17
SRP54-205ENST00000554803 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
SRP54-205ENST00000554803 BECN1Q14457 450 aa14□□□□□ -0.17
SRP54-205ENST00000554803 C8orf34Q49A92 452 aa14□□□□□ -0.17
SRP54-205ENST00000554803 CIAPIN1Q6FI81 312 aa14□□□□□ -0.17
SRP54-205ENST00000554803 JDP2Q8WYK2 163 aa14□□□□□ -0.17
SRP54-205ENST00000554803 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
SRP54-205ENST00000554803 PHACTR3Q96KR7 559 aa14□□□□□ -0.17
SRP54-205ENST00000554803 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
SRP54-205ENST00000554803 GJA3Q9Y6H8 435 aa14□□□□□ -0.17
SRP54-205ENST00000554803 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
SRP54-205ENST00000554803 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
SRP54-205ENST00000554803 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
SRP54-205ENST00000554803 PSMD1Q99460 953 aa13.99□□□□□ -0.17
SRP54-205ENST00000554803 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
SRP54-205ENST00000554803 POLR2AP24928 1970 aaKnown RBP13.98□□□□□ -0.17
SRP54-205ENST00000554803 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
SRP54-205ENST00000554803 CELF2O95319 508 aaKnown RBP13.97□□□□□ -0.17
SRP54-205ENST00000554803 NOGQ13253 232 aa13.97□□□□□ -0.17
SRP54-205ENST00000554803 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
SRP54-205ENST00000554803 TEX13AQ9BXU3 409 aaPredicted RBP13.97□□□□□ -0.17
SRP54-205ENST00000554803 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
SRP54-205ENST00000554803 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.17
SRP54-205ENST00000554803 IL16Q14005 1332 aa13.96□□□□□ -0.17
SRP54-205ENST00000554803 NBPF5PQ86XG9 351 aaPredicted RBP13.96□□□□□ -0.17
SRP54-205ENST00000554803 TTC5Q8N0Z6 440 aa13.96□□□□□ -0.17
SRP54-205ENST00000554803 GCC1Q96CN9 775 aa13.96□□□□□ -0.17
SRP54-205ENST00000554803 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
SRP54-205ENST00000554803 TMPOP42166 694 aaKnown RBP13.95□□□□□ -0.18
SRP54-205ENST00000554803 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
SRP54-205ENST00000554803 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms