RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
PSMC1-204ENST00000554624 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
PSMC1-204ENST00000554624 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
PSMC1-204ENST00000554624 DDR1Q08345 913 aa13.41□□□□□ -0.26
PSMC1-204ENST00000554624 SLC39A6Q13433 755 aa13.41□□□□□ -0.26
PSMC1-204ENST00000554624 USPL1Q5W0Q7 1092 aa13.41□□□□□ -0.26
PSMC1-204ENST00000554624 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
PSMC1-204ENST00000554624 PTPREP23469 700 aa13.4□□□□□ -0.26
PSMC1-204ENST00000554624 APLP1P51693 650 aa13.4□□□□□ -0.26
PSMC1-204ENST00000554624 PTGDRQ13258 359 aa13.4□□□□□ -0.26
PSMC1-204ENST00000554624 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.26
PSMC1-204ENST00000554624 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
PSMC1-204ENST00000554624 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
PSMC1-204ENST00000554624 A0A087WZG4 1122 aa13.39□□□□□ -0.27
PSMC1-204ENST00000554624 GPR37O15354 613 aa13.39□□□□□ -0.27
PSMC1-204ENST00000554624 ZMYND10O75800 440 aa13.39□□□□□ -0.27
PSMC1-204ENST00000554624 HIC1Q14526 733 aa13.39□□□□□ -0.27
PSMC1-204ENST00000554624 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
PSMC1-204ENST00000554624 NPC1L1Q9UHC9 1359 aa13.39□□□□□ -0.27
PSMC1-204ENST00000554624 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
PSMC1-204ENST00000554624 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
PSMC1-204ENST00000554624 TEFQ10587 303 aa13.38□□□□□ -0.27
PSMC1-204ENST00000554624 NFIXQ14938 502 aa13.38□□□□□ -0.27
PSMC1-204ENST00000554624 TSR1Q2NL82 804 aaKnown RBP13.38□□□□□ -0.27
PSMC1-204ENST00000554624 C16orf71Q8IYS4 520 aaPredicted RBP13.38□□□□□ -0.27
PSMC1-204ENST00000554624 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
PSMC1-204ENST00000554624 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
PSMC1-204ENST00000554624 SERPINB2P05120 415 aa13.37□□□□□ -0.27
PSMC1-204ENST00000554624 CHRNA5P30532 468 aa13.37□□□□□ -0.27
PSMC1-204ENST00000554624 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
PSMC1-204ENST00000554624 ZNF687Q8N1G0 1237 aa13.37□□□□□ -0.27
PSMC1-204ENST00000554624 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
PSMC1-204ENST00000554624 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
PSMC1-204ENST00000554624 H0YIN7 160 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
PSMC1-204ENST00000554624 PBX2P40425 430 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
PSMC1-204ENST00000554624 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
PSMC1-204ENST00000554624 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 RBM46Q8TBY0 533 aaKnown RBP13.36□□□□□ -0.27
PSMC1-204ENST00000554624 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 HS3ST6Q96QI5 342 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 CDHR5Q9HBB8 845 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 NPDC1Q9NQX5 325 aaPredicted RBP13.36□□□□□ -0.27
PSMC1-204ENST00000554624 C4AP0C0L4 1744 aa13.36□□□□□ -0.27
PSMC1-204ENST00000554624 FSTL1Q12841 308 aa13.35□□□□□ -0.27
PSMC1-204ENST00000554624 TTLL6Q8N841 843 aa13.35□□□□□ -0.27
PSMC1-204ENST00000554624 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
PSMC1-204ENST00000554624 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
PSMC1-204ENST00000554624 COL15A1P39059 1388 aa13.34□□□□□ -0.27
PSMC1-204ENST00000554624 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
PSMC1-204ENST00000554624 PPP1R3GB7ZBB8 358 aa13.34□□□□□ -0.27
PSMC1-204ENST00000554624 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
PSMC1-204ENST00000554624 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
PSMC1-204ENST00000554624 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
PSMC1-204ENST00000554624 ZC3H4Q9UPT8 1303 aaKnown RBP13.34□□□□□ -0.27
PSMC1-204ENST00000554624 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
PSMC1-204ENST00000554624 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
PSMC1-204ENST00000554624 LMNB1P20700 586 aa13.33□□□□□ -0.28
PSMC1-204ENST00000554624 IL6STP40189 918 aaPredicted RBP13.33□□□□□ -0.28
PSMC1-204ENST00000554624 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
PSMC1-204ENST00000554624 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
PSMC1-204ENST00000554624 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
PSMC1-204ENST00000554624 MRC1P22897 1456 aa13.32□□□□□ -0.28
PSMC1-204ENST00000554624 ARHGAP33O14559 1287 aa13.32□□□□□ -0.28
PSMC1-204ENST00000554624 PDE6BP35913 854 aa13.32□□□□□ -0.28
PSMC1-204ENST00000554624 RRAGCQ9HB90 399 aa13.32□□□□□ -0.28
PSMC1-204ENST00000554624 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
PSMC1-204ENST00000554624 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
PSMC1-204ENST00000554624 PRKCSHP14314 528 aaPredicted RBP13.31□□□□□ -0.28
PSMC1-204ENST00000554624 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
PSMC1-204ENST00000554624 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
PSMC1-204ENST00000554624 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
PSMC1-204ENST00000554624 GLTPD2A6NH11 291 aa13.3□□□□□ -0.28
PSMC1-204ENST00000554624 VEGFAP15692 232 aaPredicted RBP13.3□□□□□ -0.28
PSMC1-204ENST00000554624 RTF1Q92541 710 aaKnown RBP13.3□□□□□ -0.28
PSMC1-204ENST00000554624 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
PSMC1-204ENST00000554624 TBC1D2BQ9UPU7 963 aa13.3□□□□□ -0.28
PSMC1-204ENST00000554624 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
PSMC1-204ENST00000554624 SCN11AQ9UI33 1791 aa13.3□□□□□ -0.28
PSMC1-204ENST00000554624 HTATSF1O43719 755 aaKnown RBP13.29□□□□□ -0.28
PSMC1-204ENST00000554624 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
PSMC1-204ENST00000554624 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
PSMC1-204ENST00000554624 KCNK17Q96T54 332 aa13.29□□□□□ -0.28
PSMC1-204ENST00000554624 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PSMC1-204ENST00000554624 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
PSMC1-204ENST00000554624 KIAA1551Q9HCM1 1747 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 POTEB3A0JP26 581 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 A1BGP04217 495 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 SMC1BQ8NDV3 1235 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 ZNF622Q969S3 477 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■■■□□ 16.2
PSMC1-204ENST00000554624 ZNF330Q9Y3S2 320 aaPredicted RBP13.28□□□□□ -0.28
PSMC1-204ENST00000554624 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
PSMC1-204ENST00000554624 TJP1Q07157 1748 aa13.27□□□□□ -0.28
PSMC1-204ENST00000554624 NPHP1O15259 732 aa13.27□□□□□ -0.29
PSMC1-204ENST00000554624 SNRPA1P09661 255 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms