RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RXRBP28702 533 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 IQGAP1P46940 1657 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 KRT76Q01546 638 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 NCOA2Q15596 1464 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
ATXN3-228ENST00000554592 NBPF10Q6P3W6 841 aaKnown RBP7.65□□□□□ -1.18
ATXN3-228ENST00000554592 NBPF15Q8N660 670 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 ARHGAP23Q9P227 1491 aa7.65□□□□□ -1.18
ATXN3-228ENST00000554592 SYNMO15061 1565 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 MSH6P52701 1360 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 SPATA31A6Q5VVP1 1343 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 USP17L5A8MUK1 530 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 INHAP05111 366 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 NCOA4Q13772 614 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 IDI1Q13907 227 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 ESCO1Q5FWF5 840 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 GLMNQ92990 594 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 SERPINA10Q9UK55 444 aa7.64□□□□□ -1.19
ATXN3-228ENST00000554592 ABCC3O15438 1527 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 SLIT1O75093 1534 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 ARHGAP31Q2M1Z3 1444 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 GDF10P55107 478 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 EML3Q32P44 896 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 CCDC97Q96F63 343 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-228ENST00000554592 CALR3Q96L12 384 aaKnown RBP7.63□□□□□ -1.19
ATXN3-228ENST00000554592 DYRK1BQ9Y463 629 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 TIAM1Q13009 1591 aa7.63□□□□□ -1.19
ATXN3-228ENST00000554592 ZBTB7BO15156 539 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-228ENST00000554592 ATP9BO43861 1147 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 TAS1R3Q7RTX0 852 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 ZNF295-AS1Q8N0V1 137 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 SLC4A9Q96Q91 983 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 ZSCAN10Q96SZ4 725 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-228ENST00000554592 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 CAMSAP2Q08AD1 1489 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
ATXN3-228ENST00000554592 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
ATXN3-228ENST00000554592 DBN1Q16643 649 aa7.61□□□□□ -1.19
ATXN3-228ENST00000554592 PPARGC1BQ86YN6 1023 aaKnown RBP7.61□□□□□ -1.19
ATXN3-228ENST00000554592 NOD1Q9Y239 953 aa7.61□□□□□ -1.19
ATXN3-228ENST00000554592 EHBP1L1Q8N3D4 1523 aa7.61□□□□□ -1.19
ATXN3-228ENST00000554592 USP17L3A6NCW0 530 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 USP17L4A6NCW7 530 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 THBS1P07996 1170 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 SMTNP53814 917 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 GTF2IP78347 998 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 MTFR1Q15390 333 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 C4orf17Q53FE4 359 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 RNFT1Q5M7Z0 435 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 USP17L2Q6R6M4 530 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 SV2AQ7L0J3 742 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 USP17L1Q7RTZ2 530 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 TRIM22Q8IYM9 498 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 C19orf44Q9H6X5 657 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 RRP7BPQ9NSQ0 103 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 IQSEC3Q9UPP2 1182 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-228ENST00000554592 TBX22Q9Y458 520 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 FGD6Q6ZV73 1430 aa7.6□□□□□ -1.19
ATXN3-228ENST00000554592 KANK1Q14678 1352 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 PRDM15P57071 1507 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-228ENST00000554592 FAM181BA6NEQ2 426 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 ATF3P18847 181 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 CLDN10P78369 228 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 TLR1Q15399 786 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-228ENST00000554592 COL25A1Q9BXS0 654 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-228ENST00000554592 TIMMDC1Q9NPL8 285 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 KIAA1024Q9UPX6 916 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 NCOA3Q9Y6Q9 1424 aa7.59□□□□□ -1.19
ATXN3-228ENST00000554592 ARHGEF5Q12774 1597 aa7.59□□□□□ -1.2
ATXN3-228ENST00000554592 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
ATXN3-228ENST00000554592 CDC14CA4D256 554 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 DKK1O94907 266 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 PHKA2P46019 1235 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 GMCL1Q96IK5 515 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 TFIP11Q9UBB9 837 aaKnown RBP7.58□□□□□ -1.2
ATXN3-228ENST00000554592 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-228ENST00000554592 USP3Q9Y6I4 520 aa7.58□□□□□ -1.2
ATXN3-228ENST00000554592 NKTRP30414 1462 aaKnown RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 PPP1R15AO75807 674 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 F11P03951 625 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 EPHA4P54764 986 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 GAS6Q14393 721 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 ZSCAN1Q8NBB4 408 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 GAS2L1Q99501 681 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 QTRT2Q9H974 415 aaKnown RBP7.57□□□□□ -1.2
ATXN3-228ENST00000554592 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 MYOM3Q5VTT5 1437 aa7.57□□□□□ -1.2
ATXN3-228ENST00000554592 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms