RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 DDR1Q08345 913 aa23.03■■□□□ 1.28
PPP4R3A-203ENST00000554511 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
PPP4R3A-203ENST00000554511 PARP10Q53GL7 1025 aa23.03■■□□□ 1.28
PPP4R3A-203ENST00000554511 CLUAP1Q96AJ1 413 aa23.03■■□□□ 1.28
PPP4R3A-203ENST00000554511 SETDB2Q96T68 719 aa23.03■■□□□ 1.28
PPP4R3A-203ENST00000554511 RNF123Q5XPI4 1314 aa23.03■■□□□ 1.28
PPP4R3A-203ENST00000554511 CHMP4BQ9H444 224 aaKnown RBP23.02■■□□□ 1.28
PPP4R3A-203ENST00000554511 NIP7Q9Y221 180 aaKnown RBP eCLIP23.02■■□□□ 1.28
PPP4R3A-203ENST00000554511 ABCC4O15439 1325 aa23.02■■□□□ 1.28
PPP4R3A-203ENST00000554511 BEND3Q5T5X7 828 aa23.01■■□□□ 1.27
PPP4R3A-203ENST00000554511 INTS3Q68E01 1043 aaKnown RBP23.01■■□□□ 1.27
PPP4R3A-203ENST00000554511 ZNF34Q8IZ26 560 aa23.01■■□□□ 1.27
PPP4R3A-203ENST00000554511 CCDC191Q8NCU4 936 aa23.01■■□□□ 1.27
PPP4R3A-203ENST00000554511 ISCA1Q9BUE6 129 aa23.01■■□□□ 1.27
PPP4R3A-203ENST00000554511 BCL2L12Q9HB09 334 aa23.01■■□□□ 1.27
PPP4R3A-203ENST00000554511 KCNA3P22001 575 aa23■■□□□ 1.27
PPP4R3A-203ENST00000554511 ARHGAP27Q6ZUM4 889 aa23■■□□□ 1.27
PPP4R3A-203ENST00000554511 PPP1R42Q7Z4L9 355 aa23■■□□□ 1.27
PPP4R3A-203ENST00000554511 ATP5J2-PTCD1G3V325 749 aa22.99■■□□□ 1.27
PPP4R3A-203ENST00000554511 TM4SF1P30408 202 aa22.99■■□□□ 1.27
PPP4R3A-203ENST00000554511 CWC25Q9NXE8 425 aaPredicted RBP22.99■■□□□ 1.27
PPP4R3A-203ENST00000554511 HDAC5Q9UQL6 1122 aa22.99■■□□□ 1.27
PPP4R3A-203ENST00000554511 POLRMTO00411 1230 aaKnown RBP22.98■■□□□ 1.27
PPP4R3A-203ENST00000554511 GPTP24298 496 aa22.98■■□□□ 1.27
PPP4R3A-203ENST00000554511 TBC1D9BQ66K14 1250 aa22.98■■□□□ 1.27
PPP4R3A-203ENST00000554511 BICDL1Q6ZP65 573 aa22.98■■□□□ 1.27
PPP4R3A-203ENST00000554511 NYXQ9GZU5 481 aa22.98■■□□□ 1.27
PPP4R3A-203ENST00000554511 NEURL1BA8MQ27 555 aa22.97■■□□□ 1.27
PPP4R3A-203ENST00000554511 TMEM57Q8N5G2 664 aa22.97■■□□□ 1.27
PPP4R3A-203ENST00000554511 PIM2Q9P1W9 311 aa22.97■■□□□ 1.27
PPP4R3A-203ENST00000554511 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 HSP90B1P14625 803 aaKnown RBP22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 NFIXQ14938 502 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 TPTE2Q6XPS3 522 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 NLRP10Q86W26 655 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 ITPRIPQ8IWB1 547 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 PANK1Q8TE04 598 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 UTP14AQ9BVJ6 771 aaKnown RBP22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 C9orf78Q9NZ63 289 aaPredicted RBP22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 IBTKQ9P2D0 1353 aaPredicted RBP22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
PPP4R3A-203ENST00000554511 NPHP1O15259 732 aa22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 GTF2E1P29083 439 aaPredicted RBP22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 GCKRQ14397 625 aa22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 CWF19L2Q2TBE0 894 aaKnown RBP22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 BCORQ6W2J9 1755 aa22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 CARMIL3Q8ND23 1372 aa22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 DDX19BQ9UMR2 479 aa22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 ARFGEF2Q9Y6D5 1785 aa22.95■■□□□ 1.26
PPP4R3A-203ENST00000554511 NUP98P52948 1817 aa22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 CHRNA5P30532 468 aa22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 MVPQ14764 893 aaKnown RBP22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 DALRD3Q5D0E6 543 aaKnown RBP22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 NBPF5PQ86XG9 351 aaPredicted RBP22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 TRMT112Q9UI30 125 aaKnown RBP22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 TNNQ9UQP3 1299 aa22.94■■□□□ 1.26
PPP4R3A-203ENST00000554511 NEFLP07196 543 aa22.93■■□□□ 1.26
PPP4R3A-203ENST00000554511 GNAI3P08754 354 aa22.93■■□□□ 1.26
PPP4R3A-203ENST00000554511 RLBP1P12271 317 aa22.93■■□□□ 1.26
PPP4R3A-203ENST00000554511 BRCA1P38398 1863 aaKnown RBP22.93■■□□□ 1.26
PPP4R3A-203ENST00000554511 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
PPP4R3A-203ENST00000554511 ZBTB38Q8NAP3 1195 aaPredicted RBP22.92■■□□□ 1.26
PPP4R3A-203ENST00000554511 COG6Q9Y2V7 657 aa22.92■■□□□ 1.26
PPP4R3A-203ENST00000554511 UBN2Q6ZU65 1347 aa22.91■■□□□ 1.26
PPP4R3A-203ENST00000554511 GRM8O00222 908 aa22.91■■□□□ 1.26
PPP4R3A-203ENST00000554511 KIF3CO14782 793 aa22.91■■□□□ 1.26
PPP4R3A-203ENST00000554511 SERPINB2P05120 415 aa22.91■■□□□ 1.26
PPP4R3A-203ENST00000554511 PCCAP05165 728 aaPredicted RBP22.91■■□□□ 1.26
PPP4R3A-203ENST00000554511 C20orf194Q5TEA3 1177 aa22.91■■□□□ 1.26
PPP4R3A-203ENST00000554511 SH3TC1Q8TE82 1336 aa22.9■■□□□ 1.26
PPP4R3A-203ENST00000554511 FAM177BA6PVY3 158 aa22.9■■□□□ 1.26
PPP4R3A-203ENST00000554511 H7C1W4 665 aa22.89■■□□□ 1.25
PPP4R3A-203ENST00000554511 ST5P78524 1137 aa22.89■■□□□ 1.25
PPP4R3A-203ENST00000554511 AAMPQ13685 434 aa22.89■■□□□ 1.25
PPP4R3A-203ENST00000554511 CNBD1Q8NA66 436 aa22.89■■□□□ 1.25
PPP4R3A-203ENST00000554511 CEP350Q5VT06 3117 aa22.89■■□□□ 1.25
PPP4R3A-203ENST00000554511 UBTFL1P0CB47 393 aaPredicted RBP22.88■■□□□ 1.25
PPP4R3A-203ENST00000554511 C9orf131Q5VYM1 1079 aa22.88■■□□□ 1.25
PPP4R3A-203ENST00000554511 USP44Q9H0E7 712 aa22.88■■□□□ 1.25
PPP4R3A-203ENST00000554511 ANKRD36CQ5JPF3 1778 aa22.88■■□□□ 1.25
PPP4R3A-203ENST00000554511 ARFGEF1Q9Y6D6 1849 aa22.87■■□□□ 1.25
PPP4R3A-203ENST00000554511 ZBTB7BO15156 539 aaPredicted RBP22.87■■□□□ 1.25
PPP4R3A-203ENST00000554511 NTSR2O95665 410 aa22.87■■□□□ 1.25
PPP4R3A-203ENST00000554511 HSPA6P17066 643 aa22.87■■□□□ 1.25
PPP4R3A-203ENST00000554511 UBE3BQ7Z3V4 1068 aa22.87■■□□□ 1.25
PPP4R3A-203ENST00000554511 FAM89AQ96GI7 184 aa22.87■■□□□ 1.25
PPP4R3A-203ENST00000554511 UTYO14607 1347 aa22.86■■□□□ 1.25
PPP4R3A-203ENST00000554511 CDHR2Q9BYE9 1310 aa22.86■■□□□ 1.25
PPP4R3A-203ENST00000554511 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
PPP4R3A-203ENST00000554511 CRBNQ96SW2 442 aa22.85■■□□□ 1.25
PPP4R3A-203ENST00000554511 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
PPP4R3A-203ENST00000554511 IRS4O14654 1257 aaPredicted RBP22.84■■□□□ 1.25
PPP4R3A-203ENST00000554511 GNAI2P04899 355 aa22.84■■□□□ 1.25
PPP4R3A-203ENST00000554511 NBPF7P0C2Y1 421 aaPredicted RBP22.84■■□□□ 1.25
PPP4R3A-203ENST00000554511 NRXN2Q9P2S2 1712 aa22.83■■□□□ 1.25
PPP4R3A-203ENST00000554511 ERFEQ4G0M1 354 aa22.83■■□□□ 1.25
PPP4R3A-203ENST00000554511 RTL5Q5HYW3 569 aaPredicted RBP22.83■■□□□ 1.25
PPP4R3A-203ENST00000554511 PRR5LQ6MZQ0 368 aa22.83■■□□□ 1.25
PPP4R3A-203ENST00000554511 NUTM1Q86Y26 1132 aa22.83■■□□□ 1.25
PPP4R3A-203ENST00000554511 NLRP3Q96P20 1036 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms