RNA–Protein interactions for RNA: ENST00000554397.5

LGMN-208, Transcript of legumain, humanhuman

TSL 4

Gene LGMN, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-208ENST00000554397 CCDC27Q2M243 656 aa20.53■□□□□ 0.88
LGMN-208ENST00000554397 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
LGMN-208ENST00000554397 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
LGMN-208ENST00000554397 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
LGMN-208ENST00000554397 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
LGMN-208ENST00000554397 TCIRG1Q13488 830 aa20.52■□□□□ 0.88
LGMN-208ENST00000554397 WWC1Q8IX03 1113 aa20.52■□□□□ 0.88
LGMN-208ENST00000554397 PLBD2Q8NHP8 589 aa20.52■□□□□ 0.88
LGMN-208ENST00000554397 NMRK2Q9NPI5 230 aa20.52■□□□□ 0.88
LGMN-208ENST00000554397 RIC1Q4ADV7 1423 aa20.52■□□□□ 0.87
LGMN-208ENST00000554397 KIF3CO14782 793 aa20.51■□□□□ 0.87
LGMN-208ENST00000554397 GOLGA2Q08379 1002 aa20.51■□□□□ 0.87
LGMN-208ENST00000554397 CRY2Q49AN0 593 aa20.51■□□□□ 0.87
LGMN-208ENST00000554397 TSR2Q969E8 191 aaKnown RBP20.51■□□□□ 0.87
LGMN-208ENST00000554397 RBM17Q96I25 401 aaKnown RBP20.51■□□□□ 0.87
LGMN-208ENST00000554397 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
LGMN-208ENST00000554397 DICER1Q9UPY3 1922 aaKnown RBP20.51■□□□□ 0.87
LGMN-208ENST00000554397 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
LGMN-208ENST00000554397 LTBP3Q9NS15 1303 aa20.51■□□□□ 0.87
LGMN-208ENST00000554397 CCDC30Q5VVM6 783 aa20.5■□□□□ 0.87
LGMN-208ENST00000554397 RIC3Q7Z5B4 369 aa20.5■□□□□ 0.87
LGMN-208ENST00000554397 NLRP10Q86W26 655 aa20.5■□□□□ 0.87
LGMN-208ENST00000554397 TMX4Q9H1E5 349 aaPredicted RBP20.5■□□□□ 0.87
LGMN-208ENST00000554397 DPY19L2Q6NUT2 758 aa20.49■□□□□ 0.87
LGMN-208ENST00000554397 RTKN2Q8IZC4 609 aa20.49■□□□□ 0.87
LGMN-208ENST00000554397 C8orf58Q8NAV2 365 aa20.49■□□□□ 0.87
LGMN-208ENST00000554397 SH3TC1Q8TE82 1336 aa20.49■□□□□ 0.87
LGMN-208ENST00000554397 PRELPP51888 382 aa20.48■□□□□ 0.87
LGMN-208ENST00000554397 STK31Q9BXU1 1019 aa20.48■□□□□ 0.87
LGMN-208ENST00000554397 RRAGCQ9HB90 399 aa20.48■□□□□ 0.87
LGMN-208ENST00000554397 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
LGMN-208ENST00000554397 TOMM70O94826 608 aa20.47■□□□□ 0.87
LGMN-208ENST00000554397 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
LGMN-208ENST00000554397 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
LGMN-208ENST00000554397 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
LGMN-208ENST00000554397 ZNF428Q96B54 188 aa20.47■□□□□ 0.87
LGMN-208ENST00000554397 IL16Q14005 1332 aa20.47■□□□□ 0.87
LGMN-208ENST00000554397 ATP5J2-PTCD1G3V325 749 aa20.46■□□□□ 0.87
LGMN-208ENST00000554397 HOXA10P31260 410 aaPredicted RBP20.46■□□□□ 0.87
LGMN-208ENST00000554397 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
LGMN-208ENST00000554397 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
LGMN-208ENST00000554397 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
LGMN-208ENST00000554397 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
LGMN-208ENST00000554397 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
LGMN-208ENST00000554397 CC2D2BQ6DHV5 1058 aa20.45■□□□□ 0.86
LGMN-208ENST00000554397 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
LGMN-208ENST00000554397 CRAMP1Q96RY5 1269 aa20.45■□□□□ 0.86
LGMN-208ENST00000554397 PHAXQ9H814 394 aaKnown RBP20.45■□□□□ 0.86
LGMN-208ENST00000554397 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
LGMN-208ENST00000554397 C3orf67Q6ZVT6 689 aa20.44■□□□□ 0.86
LGMN-208ENST00000554397 TSPYL6Q8N831 410 aa20.44■□□□□ 0.86
LGMN-208ENST00000554397 ZNF277Q9NRM2 450 aaPredicted RBP20.44■□□□□ 0.86
LGMN-208ENST00000554397 LAMB2P55268 1798 aa20.44■□□□□ 0.86
LGMN-208ENST00000554397 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
LGMN-208ENST00000554397 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
LGMN-208ENST00000554397 WDR63Q8IWG1 891 aa20.43■□□□□ 0.86
LGMN-208ENST00000554397 ISCA1Q9BUE6 129 aa20.43■□□□□ 0.86
LGMN-208ENST00000554397 VEGFAP15692 232 aaPredicted RBP20.42■□□□□ 0.86
LGMN-208ENST00000554397 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
LGMN-208ENST00000554397 MYD88Q99836 296 aa20.42■□□□□ 0.86
LGMN-208ENST00000554397 HSPA6P17066 643 aa20.41■□□□□ 0.86
LGMN-208ENST00000554397 SYNE4Q8N205 404 aa20.41■□□□□ 0.86
LGMN-208ENST00000554397 RBM46Q8TBY0 533 aaKnown RBP20.41■□□□□ 0.86
LGMN-208ENST00000554397 FAM89AQ96GI7 184 aa20.41■□□□□ 0.86
LGMN-208ENST00000554397 ABCC4O15439 1325 aa20.41■□□□□ 0.86
LGMN-208ENST00000554397 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
LGMN-208ENST00000554397 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
LGMN-208ENST00000554397 IARSP41252 1262 aaKnown RBP20.4■□□□□ 0.86
LGMN-208ENST00000554397 JDP2Q8WYK2 163 aa20.4■□□□□ 0.86
LGMN-208ENST00000554397 PSMD1Q99460 953 aa20.4■□□□□ 0.86
LGMN-208ENST00000554397 MYH16Q9H6N6 1097 aa20.39■□□□□ 0.85
LGMN-208ENST00000554397 DDX60Q8IY21 1712 aaKnown RBP20.39■□□□□ 0.85
LGMN-208ENST00000554397 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
LGMN-208ENST00000554397 TRIM28Q13263 835 aaKnown RBP20.38■□□□□ 0.85
LGMN-208ENST00000554397 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
LGMN-208ENST00000554397 WDR90Q96KV7 1748 aa20.37■□□□□ 0.85
LGMN-208ENST00000554397 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
LGMN-208ENST00000554397 BBOX1O75936 387 aa20.37■□□□□ 0.85
LGMN-208ENST00000554397 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
LGMN-208ENST00000554397 GRAPQ13588 217 aa20.37■□□□□ 0.85
LGMN-208ENST00000554397 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
LGMN-208ENST00000554397 METTL22Q9BUU2 404 aaPredicted RBP20.37■□□□□ 0.85
LGMN-208ENST00000554397 CWC25Q9NXE8 425 aaPredicted RBP20.37■□□□□ 0.85
LGMN-208ENST00000554397 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
LGMN-208ENST00000554397 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
LGMN-208ENST00000554397 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
LGMN-208ENST00000554397 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
LGMN-208ENST00000554397 ZBTB38Q8NAP3 1195 aaPredicted RBP20.36■□□□□ 0.85
LGMN-208ENST00000554397 CCDC191Q8NCU4 936 aa20.36■□□□□ 0.85
LGMN-208ENST00000554397 SMC1BQ8NDV3 1235 aa20.36■□□□□ 0.85
LGMN-208ENST00000554397 CACNA1FO60840 1977 aa20.35■□□□□ 0.85
LGMN-208ENST00000554397 PI4KAP2A4QPH2 592 aa20.35■□□□□ 0.85
LGMN-208ENST00000554397 FSTL1Q12841 308 aa20.35■□□□□ 0.85
LGMN-208ENST00000554397 PI4KAP1Q8N8J0 262 aa20.35■□□□□ 0.85
LGMN-208ENST00000554397 SUPT20HQ8NEM7 779 aa20.35■□□□□ 0.85
LGMN-208ENST00000554397 TAF1P21675 1872 aa20.35■□□□□ 0.85
LGMN-208ENST00000554397 IQCA1LA6NCM1 817 aa20.34■□□□□ 0.85
LGMN-208ENST00000554397 EXOSC9Q06265 439 aaKnown RBP20.34■□□□□ 0.85
LGMN-208ENST00000554397 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
LGMN-208ENST00000554397 TMC4Q7Z404 712 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms