RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PDRG1Q9NUG6 133 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 HYPKQ9NX55 129 aa20.09■□□□□ 0.81
PPP4R3A-202ENST00000554390 C9orf78Q9NZ63 289 aaPredicted RBP20.09■□□□□ 0.81
PPP4R3A-202ENST00000554390 MORC2Q9Y6X9 1032 aaPredicted RBP20.09■□□□□ 0.81
PPP4R3A-202ENST00000554390 AACSQ86V21 672 aa20.09■□□□□ 0.81
PPP4R3A-202ENST00000554390 BOLA2Q9H3K6 86 aa20.09■□□□□ 0.81
PPP4R3A-202ENST00000554390 A0A087WWV3 80 aa20.08■□□□□ 0.81
PPP4R3A-202ENST00000554390 FAM200AQ8TCP9 573 aa20.08■□□□□ 0.81
PPP4R3A-202ENST00000554390 MAP3K5Q99683 1374 aa20.08■□□□□ 0.81
PPP4R3A-202ENST00000554390 BEND3Q5T5X7 828 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 CDC37L1Q7L3B6 337 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 LUZP1Q86V48 1076 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 KLHL34Q8N239 644 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 CCDC112Q8NEF3 446 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 KIF18AQ8NI77 898 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 DDX11Q96FC9 970 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 NRBP1Q9UHY1 535 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 MTMR6Q9Y217 621 aa20.08■□□□□ 0.8
PPP4R3A-202ENST00000554390 DRC7Q8IY82 874 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 VGLL3A8MV65 326 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 KDRP35968 1356 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 LIG1P18858 919 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 CEBPZQ03701 1054 aaKnown RBP20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 TERF2Q15554 542 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 TPCN1Q9ULQ1 816 aa20.07■□□□□ 0.8
PPP4R3A-202ENST00000554390 POLA2Q14181 598 aa20.06■□□□□ 0.8
PPP4R3A-202ENST00000554390 IFIT2P09913 472 aaKnown RBP20.06■□□□□ 0.8
PPP4R3A-202ENST00000554390 TAOK2Q9UL54 1235 aa20.06■□□□□ 0.8
PPP4R3A-202ENST00000554390 PAXBP1Q9Y5B6 917 aa20.06■□□□□ 0.8
PPP4R3A-202ENST00000554390 TUBGCP6Q96RT7 1819 aa20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 RAB11FIP3O75154 756 aa20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 EIF4A1P60842 406 aaKnown RBP20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 LRRC2Q9BYS8 371 aa20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 TTC6Q86TZ1 520 aa20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 CLASRPQ8N2M8 674 aaKnown RBP20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 MRVI1Q9Y6F6 885 aa20.05■□□□□ 0.8
PPP4R3A-202ENST00000554390 BTBD11A6QL63 1104 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 KCNA6P17658 529 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 TEFQ10587 303 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 RBM8AQ9Y5S9 174 aaKnown RBP20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 NALCNQ8IZF0 1738 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 RGPD8O14715 1765 aaPredicted RBP20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 ZSCAN25Q6NSZ9 544 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 FBXW7Q969H0 707 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 FMN2Q9NZ56 1722 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 LARP1BQ659C4 914 aaKnown RBP20.04■□□□□ 0.8
PPP4R3A-202ENST00000554390 TYRO3Q06418 890 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 TPD52L1Q16890 204 aaPredicted RBP20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 KRT222Q8N1A0 295 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 ZNF592Q92610 1267 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 A0A0D9SFI3 127 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 CDK11BP21127 795 aaKnown RBP20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 IRX5P78411 483 aaPredicted RBP20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 MAP3K11Q16584 847 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 TTC21AQ8NDW8 1320 aa20.03■□□□□ 0.8
PPP4R3A-202ENST00000554390 CCDC66A2RUB6 948 aa20.02■□□□□ 0.8
PPP4R3A-202ENST00000554390 EAF2Q96CJ1 260 aaPredicted RBP20.02■□□□□ 0.8
PPP4R3A-202ENST00000554390 TRIM5Q9C035 493 aa20.02■□□□□ 0.8
PPP4R3A-202ENST00000554390 CYP46A1Q9Y6A2 500 aa20.02■□□□□ 0.8
PPP4R3A-202ENST00000554390 FAM208AQ9UK61 1670 aaKnown RBP20.02■□□□□ 0.79
PPP4R3A-202ENST00000554390 MYL6BP14649 208 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 NUP62CLQ9H1M0 184 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 EPB41L2O43491 1005 aaKnown RBP20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 CBX8Q9HC52 389 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 ADCY9O60503 1353 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 GLRX3O76003 335 aaKnown RBP20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 KMT5BQ4FZB7 885 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 CREB3L3Q68CJ9 461 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 ZNF589Q86UQ0 364 aaPredicted RBP20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 ECHDC1Q9NTX5 307 aa20.01■□□□□ 0.79
PPP4R3A-202ENST00000554390 JAK2O60674 1132 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 ANO6Q4KMQ2 910 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 EID1Q9Y6B2 187 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 ZNF75DP51815 510 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 CEP135Q66GS9 1140 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 CCDC129Q6ZRS4 1044 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 CACTINQ8WUQ7 758 aaKnown RBP20■□□□□ 0.79
PPP4R3A-202ENST00000554390 ERCC4Q92889 916 aaPredicted RBP20■□□□□ 0.79
PPP4R3A-202ENST00000554390 SUCLG2Q96I99 432 aa20■□□□□ 0.79
PPP4R3A-202ENST00000554390 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 ZNF397Q8NF99 534 aaPredicted RBP19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 BICC1Q9H694 974 aaKnown RBP19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 DACT1Q9NYF0 836 aa19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 SASH1O94885 1247 aa19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 PLA2G4DQ86XP0 818 aa19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 FSD1Q9BTV5 496 aa19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 V9GYY5 206 aaPredicted RBP19.99■□□□□ 0.79
PPP4R3A-202ENST00000554390 SEC62Q99442 399 aaKnown RBP19.98■□□□□ 0.79
PPP4R3A-202ENST00000554390 ERICH4A6NGS2 130 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms