RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 GRIPAP1Q4V328 841 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 CC2D2BQ6DHV5 1058 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 MCM10Q7L590 875 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 CNTROBQ8N137 903 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 GPC2Q8N158 579 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 NGEFQ8N5V2 710 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 GJA3Q9Y6H8 435 aa10.82□□□□□ -0.68
ACTN1-212ENST00000554158 ECE1P42892 770 aa10.81□□□□□ -0.68
ACTN1-212ENST00000554158 LBX1P52954 281 aa10.81□□□□□ -0.68
ACTN1-212ENST00000554158 POLA2Q14181 598 aa10.81□□□□□ -0.68
ACTN1-212ENST00000554158 IFNLR1Q8IU57 520 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-212ENST00000554158 PHACTR3Q96KR7 559 aa10.81□□□□□ -0.68
ACTN1-212ENST00000554158 RSPH6AQ9H0K4 717 aa10.81□□□□□ -0.68
ACTN1-212ENST00000554158 PRAMEF22A3QJZ6 481 aa10.8□□□□□ -0.68
ACTN1-212ENST00000554158 HTATSF1O43719 755 aaKnown RBP10.8□□□□□ -0.68
ACTN1-212ENST00000554158 GRM1Q13255 1194 aa10.8□□□□□ -0.68
ACTN1-212ENST00000554158 MAP1SQ66K74 1059 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-212ENST00000554158 LARGE2Q8N3Y3 721 aa10.8□□□□□ -0.68
ACTN1-212ENST00000554158 PNISRQ8TF01 805 aaKnown RBP10.8□□□□□ -0.68
ACTN1-212ENST00000554158 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
ACTN1-212ENST00000554158 RBM17Q96I25 401 aaKnown RBP10.8□□□□□ -0.68
ACTN1-212ENST00000554158 ADAMTSL1Q8N6G6 1762 aa10.8□□□□□ -0.68
ACTN1-212ENST00000554158 FZD9O00144 591 aa10.79□□□□□ -0.68
ACTN1-212ENST00000554158 ITGBL1O95965 494 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-212ENST00000554158 TAF7Q15545 349 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-212ENST00000554158 NIM1KQ8IY84 436 aa10.79□□□□□ -0.68
ACTN1-212ENST00000554158 PSMD1Q99460 953 aa10.79□□□□□ -0.68
ACTN1-212ENST00000554158 KDM3BQ7LBC6 1761 aa10.79□□□□□ -0.68
ACTN1-212ENST00000554158 WDR33Q9C0J8 1336 aaKnown RBP10.79□□□□□ -0.68
ACTN1-212ENST00000554158 KLRG2A4D1S0 409 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-212ENST00000554158 RASSF10A6NK89 507 aa10.78□□□□□ -0.68
ACTN1-212ENST00000554158 DCTN1Q14203 1278 aa10.78□□□□□ -0.68
ACTN1-212ENST00000554158 OLFM4Q6UX06 510 aa10.78□□□□□ -0.68
ACTN1-212ENST00000554158 NUTM1Q86Y26 1132 aa10.78□□□□□ -0.68
ACTN1-212ENST00000554158 WBP1LQ9NX94 342 aa10.78□□□□□ -0.68
ACTN1-212ENST00000554158 RRP7AQ9Y3A4 280 aaKnown RBP10.78□□□□□ -0.68
ACTN1-212ENST00000554158 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 TCERG1O14776 1098 aaKnown RBP10.77□□□□□ -0.69
ACTN1-212ENST00000554158 MYL6BP14649 208 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 HLFQ16534 295 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.69
ACTN1-212ENST00000554158 PPP1R42Q7Z4L9 355 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 NBPF15Q8N660 670 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 PNNQ9H307 717 aaKnown RBP10.77□□□□□ -0.69
ACTN1-212ENST00000554158 DDX21Q9NR30 783 aaKnown RBP eCLIP10.77□□□□□ -0.69
ACTN1-212ENST00000554158 MAP3K15Q6ZN16 1313 aa10.77□□□□□ -0.69
ACTN1-212ENST00000554158 CASP8AP2Q9UKL3 1982 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 PPEF1O14829 653 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-212ENST00000554158 PPIP5K2O43314 1243 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 GPTP24298 496 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 USP50Q70EL3 339 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-212ENST00000554158 SUPT20HQ8NEM7 779 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 CAPNS2Q96L46 248 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 ZBTB3Q9H5J0 574 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 MAPK8IP3Q9UPT6 1336 aa10.76□□□□□ -0.69
ACTN1-212ENST00000554158 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 CCDC85CA6NKD9 419 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 HSPA8P11142 646 aaKnown RBP10.75□□□□□ -0.69
ACTN1-212ENST00000554158 CRY2Q49AN0 593 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 ABHD8Q96I13 439 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 NLRP3Q96P20 1036 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-212ENST00000554158 MIS18AQ9NYP9 233 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
ACTN1-212ENST00000554158 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-212ENST00000554158 AKAP11Q9UKA4 1901 aa10.74□□□□□ -0.69
ACTN1-212ENST00000554158 POLR2AP24928 1970 aaKnown RBP10.74□□□□□ -0.69
ACTN1-212ENST00000554158 PPP2R1AP30153 589 aa10.74□□□□□ -0.69
ACTN1-212ENST00000554158 PARP10Q53GL7 1025 aa10.74□□□□□ -0.69
ACTN1-212ENST00000554158 GPR101Q96P66 508 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-212ENST00000554158 CRAMP1Q96RY5 1269 aa10.74□□□□□ -0.69
ACTN1-212ENST00000554158 BCL2L13Q9BXK5 485 aa10.74□□□□□ -0.69
ACTN1-212ENST00000554158 LAMB2P55268 1798 aa10.74□□□□□ -0.69
ACTN1-212ENST00000554158 LTBP1Q14766 1721 aa10.73□□□□□ -0.69
ACTN1-212ENST00000554158 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-212ENST00000554158 EPS15P42566 896 aa10.73□□□□□ -0.69
ACTN1-212ENST00000554158 CYP4F22Q6NT55 531 aa10.73□□□□□ -0.69
ACTN1-212ENST00000554158 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
ACTN1-212ENST00000554158 ADARB2Q9NS39 739 aaKnown RBP10.73□□□□□ -0.69
ACTN1-212ENST00000554158 RIC1Q4ADV7 1423 aa10.73□□□□□ -0.69
ACTN1-212ENST00000554158 THSD7BQ9C0I4 1608 aa10.73□□□□□ -0.69
ACTN1-212ENST00000554158 CA12O43570 354 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 SCNN1DP51172 638 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 TNIP1Q15025 636 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 AOC3Q16853 763 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 SUSD4Q5VX71 490 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 DPP8Q6V1X1 898 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-212ENST00000554158 TTLL7Q6ZT98 887 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 UTP14AQ9BVJ6 771 aaKnown RBP10.72□□□□□ -0.69
ACTN1-212ENST00000554158 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
ACTN1-212ENST00000554158 CELF2O95319 508 aaKnown RBP10.71□□□□□ -0.69
ACTN1-212ENST00000554158 TAF1P21675 1872 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 MAP2K2P36507 400 aa10.71□□□□□ -0.69
ACTN1-212ENST00000554158 MLLT1Q03111 559 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-212ENST00000554158 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms