RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 UTYO14607 1347 aa13.06□□□□□ -0.32
TMEM55B-205ENST00000554028 LY75O60449 1722 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 H7C1W4 665 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 ATP8B2P98198 1209 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 USPL1Q5W0Q7 1092 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 CAMKK2Q96RR4 588 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM55B-205ENST00000554028 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 GCC1Q96CN9 775 aa13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
TMEM55B-205ENST00000554028 IGHDP01880 384 aa13.03□□□□□ -0.32
TMEM55B-205ENST00000554028 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
TMEM55B-205ENST00000554028 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
TMEM55B-205ENST00000554028 UTP14AQ9BVJ6 771 aaKnown RBP13.03□□□□□ -0.32
TMEM55B-205ENST00000554028 RREB1Q92766 1687 aa13.02□□□□□ -0.32
TMEM55B-205ENST00000554028 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
TMEM55B-205ENST00000554028 COL5A3P25940 1745 aaPredicted RBP13.02□□□□□ -0.32
TMEM55B-205ENST00000554028 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
TMEM55B-205ENST00000554028 SUCLG2Q96I99 432 aa13.02□□□□□ -0.33
TMEM55B-205ENST00000554028 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
TMEM55B-205ENST00000554028 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.33
TMEM55B-205ENST00000554028 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
TMEM55B-205ENST00000554028 NPHP1O15259 732 aa13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 SMIM5Q71RC9 77 aa13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
TMEM55B-205ENST00000554028 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 FAM177BA6PVY3 158 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 MTX1Q13505 466 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 SLC15A2Q16348 729 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 HSP90AB4PQ58FF6 505 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 SUSD4Q5VX71 490 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 SIRT2Q8IXJ6 389 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
TMEM55B-205ENST00000554028 BICC1Q9H694 974 aaKnown RBP13□□□□□ -0.33
TMEM55B-205ENST00000554028 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 CASP7P55210 303 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 TBC1D9BQ66K14 1250 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 SSH3Q8TE77 659 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 CHMP3Q9Y3E7 222 aa12.99□□□□□ -0.33
TMEM55B-205ENST00000554028 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 PDE8AO60658 829 aa12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 LMBR1LQ6UX01 489 aa12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 PLA2G12BQ9BX93 195 aa12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
TMEM55B-205ENST00000554028 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 PNMA6EA0A0J9YXQ4 647 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 RAB11FIP3O75154 756 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 GYS1P13807 737 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 G3BP1Q13283 466 aaKnown RBP eCLIP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 CCDC57Q2TAC2 916 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 RABL6Q3YEC7 729 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 ANKRD45Q5TZF3 282 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 KAZALD1Q96I82 304 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 RGPD3A6NKT7 1758 aaPredicted RBP12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 RGPD4Q7Z3J3 1758 aa12.97□□□□□ -0.33
TMEM55B-205ENST00000554028 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
TMEM55B-205ENST00000554028 NTSR2O95665 410 aa12.96□□□□□ -0.33
TMEM55B-205ENST00000554028 FOXO4P98177 505 aa12.96□□□□□ -0.33
TMEM55B-205ENST00000554028 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
TMEM55B-205ENST00000554028 ERC1Q8IUD2 1116 aa12.96□□□□□ -0.33
TMEM55B-205ENST00000554028 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
TMEM55B-205ENST00000554028 CTSWP56202 376 aa12.95□□□□□ -0.34
TMEM55B-205ENST00000554028 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
TMEM55B-205ENST00000554028 NFIXQ14938 502 aa12.95□□□□□ -0.34
TMEM55B-205ENST00000554028 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
TMEM55B-205ENST00000554028 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.343e-7■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms