RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 HHIPL1Q96JK4 782 aa12.3□□□□□ -0.44
PRKCH-208ENST00000553846 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRKCH-208ENST00000553846 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-208ENST00000553846 HTTP42858 3142 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 NPHP1O15259 732 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 CA12O43570 354 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
PRKCH-208ENST00000553846 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 PGAP2Q9UHJ9 254 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 ZNF652Q9Y2D9 606 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
PRKCH-208ENST00000553846 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
PRKCH-208ENST00000553846 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
PRKCH-208ENST00000553846 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 JDP2Q8WYK2 163 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 ZIC5Q96T25 663 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 GPRC5DQ9NZD1 345 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 GJA3Q9Y6H8 435 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
PRKCH-208ENST00000553846 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
PRKCH-208ENST00000553846 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
PRKCH-208ENST00000553846 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-208ENST00000553846 EIF6P56537 245 aaKnown RBP12.26□□□□□ -0.45
PRKCH-208ENST00000553846 C3orf67Q6ZVT6 689 aa12.26□□□□□ -0.45
PRKCH-208ENST00000553846 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
PRKCH-208ENST00000553846 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
PRKCH-208ENST00000553846 UBN2Q6ZU65 1347 aa12.26□□□□□ -0.45
PRKCH-208ENST00000553846 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
PRKCH-208ENST00000553846 ADARB2Q9NS39 739 aaKnown RBP12.25□□□□□ -0.45
PRKCH-208ENST00000553846 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
PRKCH-208ENST00000553846 LAMB2P55268 1798 aa12.25□□□□□ -0.45
PRKCH-208ENST00000553846 LRRC37AA6NMS7 1700 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
PRKCH-208ENST00000553846 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-208ENST00000553846 GRM1Q13255 1194 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 CIAPIN1Q6FI81 312 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-208ENST00000553846 LARGE2Q8N3Y3 721 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 GLIS2Q9BZE0 524 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-208ENST00000553846 BRCA2P51587 3418 aa12.24□□□□□ -0.45
PRKCH-208ENST00000553846 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
PRKCH-208ENST00000553846 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
PRKCH-208ENST00000553846 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-208ENST00000553846 CXCL9Q07325 125 aa12.23□□□□□ -0.45
PRKCH-208ENST00000553846 DGKZQ13574 1117 aa12.23□□□□□ -0.45
PRKCH-208ENST00000553846 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
PRKCH-208ENST00000553846 RTFDC1Q9BY42 306 aaPredicted RBP12.23□□□□□ -0.45
PRKCH-208ENST00000553846 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
PRKCH-208ENST00000553846 NTSR2O95665 410 aa12.22□□□□□ -0.45
PRKCH-208ENST00000553846 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
PRKCH-208ENST00000553846 TRPM4Q8TD43 1214 aa12.22□□□□□ -0.45
PRKCH-208ENST00000553846 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
PRKCH-208ENST00000553846 CENPFP49454 3210 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 MAP3K15Q6ZN16 1313 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
PRKCH-208ENST00000553846 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
PRKCH-208ENST00000553846 PRKAR2BP31323 418 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 NOGQ13253 232 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 AOC3Q16853 763 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 MCM10Q7L590 875 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 NIM1KQ8IY84 436 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
PRKCH-208ENST00000553846 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 VPS33BQ9H267 617 aa12.21□□□□□ -0.45
PRKCH-208ENST00000553846 SHTN1A0MZ66 631 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
PRKCH-208ENST00000553846 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 ZNF34Q8IZ26 560 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 ZNRF3Q9ULT6 936 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
PRKCH-208ENST00000553846 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
PRKCH-208ENST00000553846 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
PRKCH-208ENST00000553846 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
PRKCH-208ENST00000553846 LRP10Q7Z4F1 713 aa12.19□□□□□ -0.46
PRKCH-208ENST00000553846 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
PRKCH-208ENST00000553846 YDJCA8MPS7 323 aa12.18□□□□□ -0.46
PRKCH-208ENST00000553846 SOX10P56693 466 aa12.18□□□□□ -0.46
PRKCH-208ENST00000553846 KIAA2012Q0VF49 1180 aa12.18□□□□□ -0.46
PRKCH-208ENST00000553846 DCTN1Q14203 1278 aa12.18□□□□□ -0.46
PRKCH-208ENST00000553846 COL4A1P02462 1669 aa12.18□□□□□ -0.46
PRKCH-208ENST00000553846 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
PRKCH-208ENST00000553846 ABCC4O15439 1325 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 TAF1P21675 1872 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 GPTP24298 496 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
PRKCH-208ENST00000553846 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
PRKCH-208ENST00000553846 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 AKAP11Q9UKA4 1901 aa12.17□□□□□ -0.46
PRKCH-208ENST00000553846 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
PRKCH-208ENST00000553846 EGFRP00533 1210 aa12.16□□□□□ -0.46
PRKCH-208ENST00000553846 HUNKP57058 714 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms