RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 MYH16Q9H6N6 1097 aa26.29■■□□□ 1.8
XRCC3-205ENST00000553807 ADCY9O60503 1353 aa26.29■■□□□ 1.8
XRCC3-205ENST00000553807 EXOSC9Q06265 439 aaKnown RBP26.28■■□□□ 1.8
XRCC3-205ENST00000553807 PRPF40BQ6NWY9 871 aaKnown RBP26.28■■□□□ 1.8
XRCC3-205ENST00000553807 RIC3Q7Z5B4 369 aa26.28■■□□□ 1.8
XRCC3-205ENST00000553807 RIC1Q4ADV7 1423 aa26.28■■□□□ 1.8
XRCC3-205ENST00000553807 KLRG2A4D1S0 409 aaPredicted RBP26.27■■□□□ 1.8
XRCC3-205ENST00000553807 C21orf2O43822 256 aa26.27■■□□□ 1.8
XRCC3-205ENST00000553807 RASSF7Q02833 373 aa26.27■■□□□ 1.8
XRCC3-205ENST00000553807 ZNF521Q96K83 1311 aa26.27■■□□□ 1.8
XRCC3-205ENST00000553807 SLX4Q8IY92 1834 aa26.26■■□□□ 1.79
XRCC3-205ENST00000553807 ATP5J2-PTCD1G3V325 749 aa26.26■■□□□ 1.79
XRCC3-205ENST00000553807 MIER1Q8N108 512 aa26.25■■□□□ 1.79
XRCC3-205ENST00000553807 TRMT112Q9UI30 125 aaKnown RBP26.25■■□□□ 1.79
XRCC3-205ENST00000553807 RNF123Q5XPI4 1314 aa26.24■■□□□ 1.79
XRCC3-205ENST00000553807 DDX58O95786 925 aaKnown RBP26.24■■□□□ 1.79
XRCC3-205ENST00000553807 C9orf131Q5VYM1 1079 aa26.24■■□□□ 1.79
XRCC3-205ENST00000553807 RPGRQ92834 1020 aaKnown RBP26.24■■□□□ 1.79
XRCC3-205ENST00000553807 CRY2Q49AN0 593 aa26.23■■□□□ 1.79
XRCC3-205ENST00000553807 C3orf67Q6ZVT6 689 aa26.23■■□□□ 1.79
XRCC3-205ENST00000553807 ZNF526Q8TF50 670 aaPredicted RBP26.23■■□□□ 1.79
XRCC3-205ENST00000553807 ISCA1Q9BUE6 129 aa26.23■■□□□ 1.79
XRCC3-205ENST00000553807 SH3TC1Q8TE82 1336 aa26.22■■□□□ 1.79
XRCC3-205ENST00000553807 MYD88Q99836 296 aa26.22■■□□□ 1.79
XRCC3-205ENST00000553807 RNF181Q9P0P0 153 aa26.22■■□□□ 1.79
XRCC3-205ENST00000553807 VAMP4O75379 141 aa26.21■■□□□ 1.79
XRCC3-205ENST00000553807 SLC4A2P04920 1241 aa26.21■■□□□ 1.79
XRCC3-205ENST00000553807 SYNE4Q8N205 404 aa26.21■■□□□ 1.79
XRCC3-205ENST00000553807 NFKBIEO00221 500 aa26.2■■□□□ 1.78
XRCC3-205ENST00000553807 HCLS1P14317 486 aaPredicted RBP26.2■■□□□ 1.78
XRCC3-205ENST00000553807 G2E3Q7L622 706 aa26.2■■□□□ 1.78
XRCC3-205ENST00000553807 NLRP3Q96P20 1036 aa26.2■■□□□ 1.78
XRCC3-205ENST00000553807 ALDH1B1P30837 517 aa26.19■■□□□ 1.78
XRCC3-205ENST00000553807 MAP3K2Q9Y2U5 619 aa26.19■■□□□ 1.78
XRCC3-205ENST00000553807 SBF1O95248 1867 aa26.18■■□□□ 1.78
XRCC3-205ENST00000553807 SLC10A5Q5PT55 438 aa26.18■■□□□ 1.78
XRCC3-205ENST00000553807 SOGA3Q5TF21 947 aa26.18■■□□□ 1.78
XRCC3-205ENST00000553807 LAMB2P55268 1798 aa26.18■■□□□ 1.78
XRCC3-205ENST00000553807 LMNB1P20700 586 aa26.17■■□□□ 1.78
XRCC3-205ENST00000553807 RTL5Q5HYW3 569 aaPredicted RBP26.17■■□□□ 1.78
XRCC3-205ENST00000553807 FAM89AQ96GI7 184 aa26.17■■□□□ 1.78
XRCC3-205ENST00000553807 RBM17Q96I25 401 aaKnown RBP26.17■■□□□ 1.78
XRCC3-205ENST00000553807 FER1L6Q2WGJ9 1857 aa26.17■■□□□ 1.78
XRCC3-205ENST00000553807 PI4KAP2A4QPH2 592 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 HOXA10P31260 410 aaPredicted RBP26.16■■□□□ 1.78
XRCC3-205ENST00000553807 FLIIQ13045 1269 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 CCDC93Q567U6 631 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 OLFM4Q6UX06 510 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 KSR2Q6VAB6 950 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 PI4KAP1Q8N8J0 262 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 METTL22Q9BUU2 404 aaPredicted RBP26.16■■□□□ 1.78
XRCC3-205ENST00000553807 TAOK3Q9H2K8 898 aa26.16■■□□□ 1.78
XRCC3-205ENST00000553807 GPBP1L1Q9HC44 474 aaPredicted RBP26.16■■□□□ 1.78
XRCC3-205ENST00000553807 DDX60Q8IY21 1712 aaKnown RBP26.16■■□□□ 1.78
XRCC3-205ENST00000553807 E9PSI1 815 aa26.15■■□□□ 1.78
XRCC3-205ENST00000553807 PRELPP51888 382 aa26.15■■□□□ 1.78
XRCC3-205ENST00000553807 TRIM28Q13263 835 aaKnown RBP26.15■■□□□ 1.78
XRCC3-205ENST00000553807 C7orf43Q8WVR3 580 aa26.15■■□□□ 1.78
XRCC3-205ENST00000553807 TIAM2Q8IVF5 1701 aa26.14■■□□□ 1.78
XRCC3-205ENST00000553807 FKBP5Q13451 457 aaPredicted RBP26.14■■□□□ 1.78
XRCC3-205ENST00000553807 CRAMP1Q96RY5 1269 aa26.13■■□□□ 1.77
XRCC3-205ENST00000553807 CWC25Q9NXE8 425 aaPredicted RBP26.13■■□□□ 1.77
XRCC3-205ENST00000553807 PPEF1O14829 653 aaPredicted RBP26.12■■□□□ 1.77
XRCC3-205ENST00000553807 NEXNQ0ZGT2 675 aa26.12■■□□□ 1.77
XRCC3-205ENST00000553807 CCDC191Q8NCU4 936 aa26.12■■□□□ 1.77
XRCC3-205ENST00000553807 ABCC4O15439 1325 aa26.12■■□□□ 1.77
XRCC3-205ENST00000553807 LTBP3Q9NS15 1303 aa26.12■■□□□ 1.77
XRCC3-205ENST00000553807 CCDC88AQ3V6T2 1871 aa26.11■■□□□ 1.77
XRCC3-205ENST00000553807 IRS4O14654 1257 aaPredicted RBP26.11■■□□□ 1.77
XRCC3-205ENST00000553807 CDCA7LQ96GN5 454 aa26.11■■□□□ 1.77
XRCC3-205ENST00000553807 CACNA1FO60840 1977 aa26.11■■□□□ 1.77
XRCC3-205ENST00000553807 SLFN5Q08AF3 891 aa26.1■■□□□ 1.77
XRCC3-205ENST00000553807 ZBTB38Q8NAP3 1195 aaPredicted RBP26.1■■□□□ 1.77
XRCC3-205ENST00000553807 IGKV5-2P06315 115 aa26.09■■□□□ 1.77
XRCC3-205ENST00000553807 DDX46Q7L014 1031 aaKnown RBP26.09■■□□□ 1.77
XRCC3-205ENST00000553807 SLC51AQ86UW1 340 aa26.09■■□□□ 1.77
XRCC3-205ENST00000553807 RTKN2Q8IZC4 609 aa26.09■■□□□ 1.77
XRCC3-205ENST00000553807 JARID2Q92833 1246 aaPredicted RBP26.09■■□□□ 1.77
XRCC3-205ENST00000553807 CWF19L2Q2TBE0 894 aaKnown RBP26.08■■□□□ 1.77
XRCC3-205ENST00000553807 PCCAP05165 728 aaPredicted RBP26.07■■□□□ 1.76
XRCC3-205ENST00000553807 FKBP4Q02790 459 aaKnown RBP eCLIP26.07■■□□□ 1.76
XRCC3-205ENST00000553807 ZC3H4Q9UPT8 1303 aaKnown RBP26.07■■□□□ 1.76
XRCC3-205ENST00000553807 DNAAF4Q8WXU2 420 aa26.06■■□□□ 1.76
XRCC3-205ENST00000553807 ZNF277Q9NRM2 450 aaPredicted RBP26.06■■□□□ 1.76
XRCC3-205ENST00000553807 NEURL1BA8MQ27 555 aa26.05■■□□□ 1.76
XRCC3-205ENST00000553807 CC2D2BQ6DHV5 1058 aa26.05■■□□□ 1.76
XRCC3-205ENST00000553807 SNED1Q8TER0 1413 aa26.05■■□□□ 1.76
XRCC3-205ENST00000553807 HSP90B1P14625 803 aaKnown RBP26.04■■□□□ 1.76
XRCC3-205ENST00000553807 GRAPQ13588 217 aa26.04■■□□□ 1.76
XRCC3-205ENST00000553807 GRAPLQ8TC17 118 aaPredicted RBP26.04■■□□□ 1.76
XRCC3-205ENST00000553807 TMX4Q9H1E5 349 aaPredicted RBP26.04■■□□□ 1.76
XRCC3-205ENST00000553807 DICER1Q9UPY3 1922 aaKnown RBP26.04■■□□□ 1.76
XRCC3-205ENST00000553807 TAF1P21675 1872 aa26.03■■□□□ 1.76
XRCC3-205ENST00000553807 F6X3S4 739 aa26.03■■□□□ 1.76
XRCC3-205ENST00000553807 SF3B3Q15393 1217 aaKnown RBP26.03■■□□□ 1.76
XRCC3-205ENST00000553807 NMRK2Q9NPI5 230 aa26.03■■□□□ 1.76
XRCC3-205ENST00000553807 ATP6V0A2Q9Y487 856 aa26.03■■□□□ 1.76
XRCC3-205ENST00000553807 KDM2BQ8NHM5 1336 aa26.03■■□□□ 1.76
XRCC3-205ENST00000553807 BBOX1O75936 387 aa26.01■■□□□ 1.75
XRCC3-205ENST00000553807 PSMD1Q99460 953 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms