RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
CFAP54-204ENST00000553778 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
CFAP54-204ENST00000553778 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
CFAP54-204ENST00000553778 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
CFAP54-204ENST00000553778 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
CFAP54-204ENST00000553778 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
CFAP54-204ENST00000553778 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
CFAP54-204ENST00000553778 KIAA1524Q8TCG1 905 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 JARID2Q92833 1246 aaPredicted RBP12.03□□□□□ -0.48
CFAP54-204ENST00000553778 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
CFAP54-204ENST00000553778 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 PROM2Q8N271 834 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 ATG3Q9NT62 314 aa12.03□□□□□ -0.48
CFAP54-204ENST00000553778 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
CFAP54-204ENST00000553778 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 ZBTB22O15209 634 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 FOXD4L1Q9NU39 408 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 FAM53CQ9NYF3 392 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 TNNQ9UQP3 1299 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 BTAF1O14981 1849 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 ITGB4P16144 1822 aa12.02□□□□□ -0.49
CFAP54-204ENST00000553778 TOGARAM1Q9Y4F4 1720 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 PALLDQ8WX93 1383 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 MMP14P50281 582 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 NCBP1Q09161 790 aaKnown RBP12.01□□□□□ -0.49
CFAP54-204ENST00000553778 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
CFAP54-204ENST00000553778 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 KRT222Q8N1A0 295 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
CFAP54-204ENST00000553778 ZBTB40Q9NUA8 1239 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 SCN11AQ9UI33 1791 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 TTC5Q8N0Z6 440 aa12.01□□□□□ -0.49
CFAP54-204ENST00000553778 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
CFAP54-204ENST00000553778 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
CFAP54-204ENST00000553778 CDC45O75419 566 aa12□□□□□ -0.49
CFAP54-204ENST00000553778 SLC39A6Q13433 755 aa12□□□□□ -0.49
CFAP54-204ENST00000553778 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
CFAP54-204ENST00000553778 USP25Q9UHP3 1055 aa12□□□□□ -0.49
CFAP54-204ENST00000553778 LOC102724428A0A0B4J2F2 783 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 PTCD1O75127 700 aaKnown RBP11.99□□□□□ -0.49
CFAP54-204ENST00000553778 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 SIK1P57059 783 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 ZDHHC9Q9Y397 364 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 SMTNL1A8MU46 457 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 ST18O60284 1047 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 CAPN2P17655 700 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 ZNF790Q6PG37 636 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 THUMPD2Q9BTF0 503 aaKnown RBP11.99□□□□□ -0.49
CFAP54-204ENST00000553778 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
CFAP54-204ENST00000553778 KCNQ4P56696 695 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 RNF214Q8ND24 703 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 PAXBP1Q9Y5B6 917 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 MRC1P22897 1456 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 GOLGA6L6A8MZA4 724 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 IGSF3O75054 1194 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 ADCY5O95622 1261 aa11.98□□□□□ -0.49
CFAP54-204ENST00000553778 TTC12Q9H892 705 aaPredicted RBP11.98□□□□□ -0.49
CFAP54-204ENST00000553778 DLG5Q8TDM6 1919 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 TRIM27P14373 513 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 BRD2P25440 801 aaKnown RBP11.97□□□□□ -0.49
CFAP54-204ENST00000553778 SLFNL1Q499Z3 407 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 CTR9Q6PD62 1173 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 STK32BQ9NY57 414 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 MIS18AQ9NYP9 233 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 RGPD3A6NKT7 1758 aaPredicted RBP11.97□□□□□ -0.49
CFAP54-204ENST00000553778 RGPD4Q7Z3J3 1758 aa11.97□□□□□ -0.49
CFAP54-204ENST00000553778 FMNL2Q96PY5 1086 aa11.96□□□□□ -0.49
CFAP54-204ENST00000553778 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
CFAP54-204ENST00000553778 NSFL1CQ9UNZ2 370 aaKnown RBP11.96□□□□□ -0.49
CFAP54-204ENST00000553778 KDM4AO75164 1064 aa11.96□□□□□ -0.5
CFAP54-204ENST00000553778 PKP1Q13835 747 aa11.96□□□□□ -0.5
CFAP54-204ENST00000553778 ZNF397Q8NF99 534 aaPredicted RBP11.96□□□□□ -0.5
CFAP54-204ENST00000553778 LNPKQ9C0E8 428 aa11.96□□□□□ -0.5
CFAP54-204ENST00000553778 TSPYL4Q9UJ04 414 aa11.96□□□□□ -0.5
CFAP54-204ENST00000553778 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
CFAP54-204ENST00000553778 BRD1O95696 1058 aa11.95□□□□□ -0.5
CFAP54-204ENST00000553778 MCM2P49736 904 aa11.95□□□□□ -0.5
CFAP54-204ENST00000553778 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
CFAP54-204ENST00000553778 LY75O60449 1722 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 KCNQ3O43525 872 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 TMEM87AQ8NBN3 555 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
CFAP54-204ENST00000553778 SLC4A9Q96Q91 983 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
CFAP54-204ENST00000553778 FEZ2Q9UHY8 353 aaPredicted RBP11.94□□□□□ -0.5
CFAP54-204ENST00000553778 RAD50Q92878 1312 aa11.94□□□□□ -0.5
CFAP54-204ENST00000553778 TRIM6-TRIM34B2RNG4 842 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms