RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SETDB2Q96T68 719 aa22.86■■□□□ 1.25
PSEN1-208ENST00000553719 NTSR2O95665 410 aa22.85■■□□□ 1.25
PSEN1-208ENST00000553719 MMP10P09238 476 aa22.85■■□□□ 1.25
PSEN1-208ENST00000553719 MS4A1P11836 297 aa22.85■■□□□ 1.25
PSEN1-208ENST00000553719 SUSD4Q5VX71 490 aa22.85■■□□□ 1.25
PSEN1-208ENST00000553719 BICDL1Q6ZP65 573 aa22.85■■□□□ 1.25
PSEN1-208ENST00000553719 PANK1Q8TE04 598 aa22.85■■□□□ 1.25
PSEN1-208ENST00000553719 LAMB2P55268 1798 aa22.84■■□□□ 1.25
PSEN1-208ENST00000553719 GCKRQ14397 625 aa22.84■■□□□ 1.25
PSEN1-208ENST00000553719 FTSJ3Q8IY81 847 aaKnown RBP22.84■■□□□ 1.25
PSEN1-208ENST00000553719 CWC25Q9NXE8 425 aaPredicted RBP22.84■■□□□ 1.25
PSEN1-208ENST00000553719 PTGER2P43116 358 aa22.83■■□□□ 1.25
PSEN1-208ENST00000553719 UTYO14607 1347 aa22.82■■□□□ 1.24
PSEN1-208ENST00000553719 CASP7P55210 303 aa22.82■■□□□ 1.24
PSEN1-208ENST00000553719 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
PSEN1-208ENST00000553719 RIC1Q4ADV7 1423 aa22.82■■□□□ 1.24
PSEN1-208ENST00000553719 SERPINB2P05120 415 aa22.81■■□□□ 1.24
PSEN1-208ENST00000553719 ATF5Q9Y2D1 282 aaPredicted RBP22.81■■□□□ 1.24
PSEN1-208ENST00000553719 KIF13BQ9NQT8 1826 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 ABCC12Q96J65 1359 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 ANKRD31Q8N7Z5 1873 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 H7C1W4 665 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 PCCAP05165 728 aaPredicted RBP22.8■■□□□ 1.24
PSEN1-208ENST00000553719 MVPQ14764 893 aaKnown RBP22.8■■□□□ 1.24
PSEN1-208ENST00000553719 PRR5LQ6MZQ0 368 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 PPP1R42Q7Z4L9 355 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 ZBTB38Q8NAP3 1195 aaPredicted RBP22.8■■□□□ 1.24
PSEN1-208ENST00000553719 UTP14AQ9BVJ6 771 aaKnown RBP22.8■■□□□ 1.24
PSEN1-208ENST00000553719 USP44Q9H0E7 712 aa22.8■■□□□ 1.24
PSEN1-208ENST00000553719 TNRC6CQ9HCJ0 1690 aaKnown RBP22.8■■□□□ 1.24
PSEN1-208ENST00000553719 NBPF5PQ86XG9 351 aaPredicted RBP22.79■■□□□ 1.24
PSEN1-208ENST00000553719 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
PSEN1-208ENST00000553719 C10orf71Q711Q0 1435 aa22.79■■□□□ 1.24
PSEN1-208ENST00000553719 CDHR2Q9BYE9 1310 aa22.79■■□□□ 1.24
PSEN1-208ENST00000553719 GRM8O00222 908 aa22.78■■□□□ 1.24
PSEN1-208ENST00000553719 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
PSEN1-208ENST00000553719 PARP3Q9Y6F1 533 aa22.78■■□□□ 1.24
PSEN1-208ENST00000553719 SH3TC1Q8TE82 1336 aa22.78■■□□□ 1.24
PSEN1-208ENST00000553719 NBPF7P0C2Y1 421 aaPredicted RBP22.77■■□□□ 1.24
PSEN1-208ENST00000553719 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
PSEN1-208ENST00000553719 ITPRIPQ8IWB1 547 aa22.77■■□□□ 1.24
PSEN1-208ENST00000553719 SYNE4Q8N205 404 aa22.77■■□□□ 1.24
PSEN1-208ENST00000553719 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
PSEN1-208ENST00000553719 FAM89AQ96GI7 184 aa22.77■■□□□ 1.24
PSEN1-208ENST00000553719 COG6Q9Y2V7 657 aa22.77■■□□□ 1.24
PSEN1-208ENST00000553719 FAM177BA6PVY3 158 aa22.76■■□□□ 1.23
PSEN1-208ENST00000553719 ZBTB7BO15156 539 aaPredicted RBP22.76■■□□□ 1.23
PSEN1-208ENST00000553719 ERFEQ4G0M1 354 aa22.76■■□□□ 1.23
PSEN1-208ENST00000553719 SLC10A5Q5PT55 438 aa22.76■■□□□ 1.23
PSEN1-208ENST00000553719 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
PSEN1-208ENST00000553719 MEIS3Q99687 375 aa22.76■■□□□ 1.23
PSEN1-208ENST00000553719 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
PSEN1-208ENST00000553719 LRP5O75197 1615 aa22.75■■□□□ 1.23
PSEN1-208ENST00000553719 KIAA1551Q9HCM1 1747 aa22.75■■□□□ 1.23
PSEN1-208ENST00000553719 POLD1P28340 1107 aa22.75■■□□□ 1.23
PSEN1-208ENST00000553719 UBE3BQ7Z3V4 1068 aa22.75■■□□□ 1.23
PSEN1-208ENST00000553719 SRCAPQ6ZRS2 3230 aa22.74■■□□□ 1.23
PSEN1-208ENST00000553719 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
PSEN1-208ENST00000553719 KAZALD1Q96I82 304 aa22.74■■□□□ 1.23
PSEN1-208ENST00000553719 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
PSEN1-208ENST00000553719 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
PSEN1-208ENST00000553719 DDX19BQ9UMR2 479 aa22.74■■□□□ 1.23
PSEN1-208ENST00000553719 MYH3P11055 1940 aa22.73■■□□□ 1.23
PSEN1-208ENST00000553719 COL11A2P13942 1736 aaPredicted RBP22.73■■□□□ 1.23
PSEN1-208ENST00000553719 IRS4O14654 1257 aaPredicted RBP22.72■■□□□ 1.23
PSEN1-208ENST00000553719 RTL5Q5HYW3 569 aaPredicted RBP22.72■■□□□ 1.23
PSEN1-208ENST00000553719 KLRG2A4D1S0 409 aaPredicted RBP22.71■■□□□ 1.23
PSEN1-208ENST00000553719 ST5P78524 1137 aa22.71■■□□□ 1.23
PSEN1-208ENST00000553719 CCDC24Q8N4L8 307 aa22.71■■□□□ 1.23
PSEN1-208ENST00000553719 SUCLG2Q96I99 432 aa22.71■■□□□ 1.23
PSEN1-208ENST00000553719 CRBNQ96SW2 442 aa22.71■■□□□ 1.23
PSEN1-208ENST00000553719 GNAI3P08754 354 aa22.7■■□□□ 1.22
PSEN1-208ENST00000553719 HCLS1P14317 486 aaPredicted RBP22.7■■□□□ 1.22
PSEN1-208ENST00000553719 C3orf67Q6ZVT6 689 aa22.7■■□□□ 1.22
PSEN1-208ENST00000553719 ZBTB40Q9NUA8 1239 aa22.7■■□□□ 1.22
PSEN1-208ENST00000553719 DLEC1Q9Y238 1755 aa22.69■■□□□ 1.22
PSEN1-208ENST00000553719 UBTFL1P0CB47 393 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-208ENST00000553719 EPHA10Q5JZY3 1008 aa22.69■■□□□ 1.22
PSEN1-208ENST00000553719 BRIP1Q9BX63 1249 aa22.69■■□□□ 1.22
PSEN1-208ENST00000553719 PDE8AO60658 829 aa22.68■■□□□ 1.22
PSEN1-208ENST00000553719 GTF2E1P29083 439 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-208ENST00000553719 FOXO4P98177 505 aa22.68■■□□□ 1.22
PSEN1-208ENST00000553719 RABL6Q3YEC7 729 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-208ENST00000553719 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
PSEN1-208ENST00000553719 ANKRD44Q8N8A2 993 aa22.67■■□□□ 1.22
PSEN1-208ENST00000553719 CSF1RP07333 972 aa22.66■■□□□ 1.22
PSEN1-208ENST00000553719 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
PSEN1-208ENST00000553719 SF3B3Q15393 1217 aaKnown RBP22.66■■□□□ 1.22
PSEN1-208ENST00000553719 LRRFIP2Q9Y608 721 aaKnown RBP22.66■■□□□ 1.22
PSEN1-208ENST00000553719 RTL9Q8NET4 1388 aa22.65■■□□□ 1.22
PSEN1-208ENST00000553719 COL4A1P02462 1669 aa22.65■■□□□ 1.22
PSEN1-208ENST00000553719 NPHP1O15259 732 aa22.65■■□□□ 1.22
PSEN1-208ENST00000553719 CTSWP56202 376 aa22.65■■□□□ 1.22
PSEN1-208ENST00000553719 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
PSEN1-208ENST00000553719 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
PSEN1-208ENST00000553719 GNAI2P04899 355 aa22.64■■□□□ 1.21
PSEN1-208ENST00000553719 TTLL11Q8NHH1 800 aa22.64■■□□□ 1.21
PSEN1-208ENST00000553719 EXOC6Q8TAG9 804 aa22.64■■□□□ 1.21
PSEN1-208ENST00000553719 CHMP4BQ9H444 224 aaKnown RBP22.64■■□□□ 1.21
PSEN1-208ENST00000553719 CD2APQ9Y5K6 639 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms