RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 GNB5O14775 395 aa8.38□□□□□ -1.07
SCFD1-210ENST00000553693 EPXP11678 715 aa8.38□□□□□ -1.07
SCFD1-210ENST00000553693 AMPD1P23109 780 aa8.38□□□□□ -1.07
SCFD1-210ENST00000553693 ALDH16A1Q8IZ83 802 aa8.38□□□□□ -1.07
SCFD1-210ENST00000553693 ARXQ96QS3 562 aa8.38□□□□□ -1.07
SCFD1-210ENST00000553693 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
SCFD1-210ENST00000553693 PIK3R2O00459 728 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 RTN1Q16799 776 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 HSH2DQ96JZ2 352 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
SCFD1-210ENST00000553693 NOVA2Q9UNW9 492 aaKnown RBP8.37□□□□□ -1.07
SCFD1-210ENST00000553693 FOXO3O43524 673 aa8.36□□□□□ -1.07
SCFD1-210ENST00000553693 NEUROD1Q13562 356 aa8.36□□□□□ -1.07
SCFD1-210ENST00000553693 NKAPLQ5M9Q1 402 aa8.36□□□□□ -1.07
SCFD1-210ENST00000553693 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-210ENST00000553693 BRD7Q9NPI1 651 aa8.36□□□□□ -1.07
SCFD1-210ENST00000553693 HCN2Q9UL51 889 aa8.36□□□□□ -1.07
SCFD1-210ENST00000553693 TYRO3Q06418 890 aa8.35□□□□□ -1.07
SCFD1-210ENST00000553693 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
SCFD1-210ENST00000553693 WEE1P30291 646 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 KCNQ4P56696 695 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
SCFD1-210ENST00000553693 ELOAQ14241 798 aaKnown RBP8.34□□□□□ -1.07
SCFD1-210ENST00000553693 SWI5Q1ZZU3 235 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 LCE1DQ5T752 114 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 IER5Q5VY09 327 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 ZNF280CQ8ND82 737 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 SERPINA10Q9UK55 444 aa8.34□□□□□ -1.07
SCFD1-210ENST00000553693 LGR5O75473 907 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 DGKGP49619 791 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 SFSWAPQ12872 951 aaKnown RBP8.33□□□□□ -1.08
SCFD1-210ENST00000553693 BTLAQ7Z6A9 289 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 FCHSD1Q86WN1 690 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 KCNH4Q9UQ05 1017 aa8.33□□□□□ -1.08
SCFD1-210ENST00000553693 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
SCFD1-210ENST00000553693 TGFBR3LH3BV60 316 aa8.32□□□□□ -1.08
SCFD1-210ENST00000553693 SIN3BO75182 1162 aa8.32□□□□□ -1.08
SCFD1-210ENST00000553693 GATA4P43694 442 aa8.32□□□□□ -1.08
SCFD1-210ENST00000553693 CHSY3Q70JA7 882 aa8.32□□□□□ -1.08
SCFD1-210ENST00000553693 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
SCFD1-210ENST00000553693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.08
SCFD1-210ENST00000553693 KLF15Q9UIH9 416 aa8.32□□□□□ -1.08
SCFD1-210ENST00000553693 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
SCFD1-210ENST00000553693 NOP53Q9NZM5 478 aaKnown RBP8.31□□□□□ -1.08
SCFD1-210ENST00000553693 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ELOA3CA0A087WX78 387 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ELOA3DA6NLF2 546 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ATG7O95352 703 aa8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ALAS2P22557 587 aa8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ELOA3BQ3SY89 546 aa8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ELOA3Q8NG57 546 aa8.3□□□□□ -1.08
SCFD1-210ENST00000553693 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
SCFD1-210ENST00000553693 ZMIZ1Q9ULJ6 1067 aa8.3□□□□□ -1.08
SCFD1-210ENST00000553693 EPB42P16452 691 aa8.29□□□□□ -1.08
SCFD1-210ENST00000553693 PBXIP1Q96AQ6 731 aa8.29□□□□□ -1.08
SCFD1-210ENST00000553693 EFCC1Q9HA90 598 aa8.29□□□□□ -1.08
SCFD1-210ENST00000553693 ADARB2-AS1A8MUL3 147 aa8.28□□□□□ -1.08
SCFD1-210ENST00000553693 DYRK3O43781 588 aa8.28□□□□□ -1.08
SCFD1-210ENST00000553693 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
SCFD1-210ENST00000553693 MYO19Q96H55 970 aa8.28□□□□□ -1.08
SCFD1-210ENST00000553693 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
SCFD1-210ENST00000553693 SRPK2P78362 688 aaKnown RBP8.27□□□□□ -1.09
SCFD1-210ENST00000553693 DGKZQ13574 1117 aa8.27□□□□□ -1.09
SCFD1-210ENST00000553693 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
SCFD1-210ENST00000553693 TPSG1Q9NRR2 321 aa8.27□□□□□ -1.09
SCFD1-210ENST00000553693 RAB44Q7Z6P3 723 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-210ENST00000553693 BHMTQ93088 406 aa8.26□□□□□ -1.09
SCFD1-210ENST00000553693 MDFIQ99750 246 aa8.26□□□□□ -1.09
SCFD1-210ENST00000553693 KLK14Q9P0G3 267 aa8.26□□□□□ -1.09
SCFD1-210ENST00000553693 BCS1LQ9Y276 419 aa8.26□□□□□ -1.09
SCFD1-210ENST00000553693 PRMT3O60678 531 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 ADH7P40394 386 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 IDH3AP50213 366 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 ARSDP51689 593 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
SCFD1-210ENST00000553693 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
SCFD1-210ENST00000553693 ARID3CA6NKF2 412 aa8.24□□□□□ -1.09
SCFD1-210ENST00000553693 FAM69CQ0P6D2 419 aa8.24□□□□□ -1.09
SCFD1-210ENST00000553693 FKBP5Q13451 457 aaPredicted RBP8.24□□□□□ -1.09
SCFD1-210ENST00000553693 OCLNQ16625 522 aa8.24□□□□□ -1.09
SCFD1-210ENST00000553693 COL26A1Q96A83 441 aa8.24□□□□□ -1.09
SCFD1-210ENST00000553693 INPP5BP32019 993 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 CCINQ13939 588 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 PRSS36Q5K4E3 855 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 C14orf37Q86TY3 774 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 TRIM11Q96F44 468 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 C11orf16Q9NQ32 467 aa8.23□□□□□ -1.09
SCFD1-210ENST00000553693 SPDYE3A6NKU9 549 aa8.22□□□□□ -1.09
SCFD1-210ENST00000553693 MICAL2O94851 1124 aa8.22□□□□□ -1.09
SCFD1-210ENST00000553693 CLP1Q92989 425 aaKnown RBP8.22□□□□□ -1.09
SCFD1-210ENST00000553693 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms