RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 RIC1Q4ADV7 1423 aa11.4□□□□□ -0.58
NPC2-204ENST00000553490 TNRC18O15417 2968 aaPredicted RBP11.4□□□□□ -0.59
NPC2-204ENST00000553490 EPS15P42566 896 aa11.39□□□□□ -0.59
NPC2-204ENST00000553490 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
NPC2-204ENST00000553490 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
NPC2-204ENST00000553490 TLL2Q9Y6L7 1015 aa11.39□□□□□ -0.59
NPC2-204ENST00000553490 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 AOC2O75106 756 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 SNRPA1P09661 255 aaKnown RBP11.38□□□□□ -0.59
NPC2-204ENST00000553490 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
NPC2-204ENST00000553490 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 CC2D2BQ6DHV5 1058 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 NBPF10Q6P3W6 841 aaKnown RBP11.38□□□□□ -0.59
NPC2-204ENST00000553490 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
NPC2-204ENST00000553490 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
NPC2-204ENST00000553490 CA12O43570 354 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 PRKAR2BP31323 418 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 MAP2K2P36507 400 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 HLFQ16534 295 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 CST9Q5W186 159 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 NIM1KQ8IY84 436 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
NPC2-204ENST00000553490 NYXQ9GZU5 481 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 IBTKQ9P2D0 1353 aaPredicted RBP11.37□□□□□ -0.59
NPC2-204ENST00000553490 NUP98P52948 1817 aa11.37□□□□□ -0.59
NPC2-204ENST00000553490 PDE4DIPQ5VU43 2346 aa11.36□□□□□ -0.59
NPC2-204ENST00000553490 CASP8AP2Q9UKL3 1982 aa11.36□□□□□ -0.59
NPC2-204ENST00000553490 SLC51AQ86UW1 340 aa11.36□□□□□ -0.59
NPC2-204ENST00000553490 PHACTR3Q96KR7 559 aa11.36□□□□□ -0.59
NPC2-204ENST00000553490 ADARB2Q9NS39 739 aaKnown RBP11.36□□□□□ -0.59
NPC2-204ENST00000553490 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
NPC2-204ENST00000553490 PPIP5K2O43314 1243 aa11.35□□□□□ -0.59
NPC2-204ENST00000553490 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
NPC2-204ENST00000553490 BRPF1P55201 1214 aaPredicted RBP11.35□□□□□ -0.59
NPC2-204ENST00000553490 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
NPC2-204ENST00000553490 MCM10Q7L590 875 aa11.35□□□□□ -0.59
NPC2-204ENST00000553490 SAPCD2Q86UD0 394 aa11.35□□□□□ -0.59
NPC2-204ENST00000553490 RTF1Q92541 710 aaKnown RBP11.35□□□□□ -0.59
NPC2-204ENST00000553490 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
NPC2-204ENST00000553490 KDM3BQ7LBC6 1761 aa11.34□□□□□ -0.59
NPC2-204ENST00000553490 NPC1L1Q9UHC9 1359 aa11.34□□□□□ -0.59
NPC2-204ENST00000553490 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
NPC2-204ENST00000553490 DGKZQ13574 1117 aa11.34□□□□□ -0.59
NPC2-204ENST00000553490 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
NPC2-204ENST00000553490 ZNF408Q9H9D4 720 aa11.34□□□□□ -0.59
NPC2-204ENST00000553490 GPRC5DQ9NZD1 345 aa11.34□□□□□ -0.59
NPC2-204ENST00000553490 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
NPC2-204ENST00000553490 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.6
NPC2-204ENST00000553490 AOC3Q16853 763 aa11.33□□□□□ -0.6
NPC2-204ENST00000553490 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NPC2-204ENST00000553490 HHIPL1Q96JK4 782 aa11.33□□□□□ -0.6
NPC2-204ENST00000553490 GLIS2Q9BZE0 524 aaPredicted RBP11.33□□□□□ -0.6
NPC2-204ENST00000553490 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
NPC2-204ENST00000553490 UBN2Q6ZU65 1347 aa11.33□□□□□ -0.6
NPC2-204ENST00000553490 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
NPC2-204ENST00000553490 GPTP24298 496 aa11.32□□□□□ -0.6
NPC2-204ENST00000553490 DCTN1Q14203 1278 aa11.32□□□□□ -0.6
NPC2-204ENST00000553490 CIAPIN1Q6FI81 312 aa11.32□□□□□ -0.6
NPC2-204ENST00000553490 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
NPC2-204ENST00000553490 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
NPC2-204ENST00000553490 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
NPC2-204ENST00000553490 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
NPC2-204ENST00000553490 ERVV-1B6SEH8 477 aa11.31□□□□□ -0.6
NPC2-204ENST00000553490 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
NPC2-204ENST00000553490 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
NPC2-204ENST00000553490 NTSR2O95665 410 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 CXCL9Q07325 125 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 NOGQ13253 232 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 ZNRF3Q9ULT6 936 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 LAMB2P55268 1798 aa11.3□□□□□ -0.6
NPC2-204ENST00000553490 U2AF1L5P0DN76 240 aaPredicted RBP11.29□□□□□ -0.6
NPC2-204ENST00000553490 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPC2-204ENST00000553490 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 ABCC4O15439 1325 aa11.29□□□□□ -0.6
NPC2-204ENST00000553490 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 MYL6BP14649 208 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 SOX10P56693 466 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 HUNKP57058 714 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
NPC2-204ENST00000553490 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 ZC3H15Q8WU90 426 aaKnown RBP11.28□□□□□ -0.6
NPC2-204ENST00000553490 ZIC5Q96T25 663 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 VPS33BQ9H267 617 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
NPC2-204ENST00000553490 DLG5Q8TDM6 1919 aa11.28□□□□□ -0.6
NPC2-204ENST00000553490 LRRC37AA6NMS7 1700 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms