RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PKP1Q13835 747 aa15.58■□□□□ 0.08
SHMT2-205ENST00000553474 TM6SF1Q9BZW5 370 aa15.58■□□□□ 0.08
SHMT2-205ENST00000553474 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-205ENST00000553474 RIC3Q7Z5B4 369 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 PANK2Q9BZ23 570 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 WDR33Q9C0J8 1336 aaKnown RBP15.57■□□□□ 0.08
SHMT2-205ENST00000553474 DISP2A7MBM2 1401 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 CWF19L2Q2TBE0 894 aaKnown RBP15.57■□□□□ 0.08
SHMT2-205ENST00000553474 GAS2L3Q86XJ1 694 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 UBE2Q2Q8WVN8 375 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 KCNB2Q92953 911 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 METTL22Q9BUU2 404 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-205ENST00000553474 SNRKQ9NRH2 765 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 THRAP3Q9Y2W1 955 aaKnown RBP15.57■□□□□ 0.08
SHMT2-205ENST00000553474 SNX14Q9Y5W7 946 aa15.57■□□□□ 0.08
SHMT2-205ENST00000553474 NEURL1BA8MQ27 555 aa15.56■□□□□ 0.08
SHMT2-205ENST00000553474 CCDC173Q0VFZ6 552 aa15.56■□□□□ 0.08
SHMT2-205ENST00000553474 TTC5Q8N0Z6 440 aa15.56■□□□□ 0.08
SHMT2-205ENST00000553474 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
SHMT2-205ENST00000553474 TTC14Q96N46 770 aa15.56■□□□□ 0.08
SHMT2-205ENST00000553474 FMNL2Q96PY5 1086 aa15.56■□□□□ 0.08
SHMT2-205ENST00000553474 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-205ENST00000553474 KAT6BQ8WYB5 2073 aa15.55■□□□□ 0.08
SHMT2-205ENST00000553474 GCKRQ14397 625 aa15.55■□□□□ 0.08
SHMT2-205ENST00000553474 POTEAQ6S8J7 498 aa15.55■□□□□ 0.08
SHMT2-205ENST00000553474 KAZALD1Q96I82 304 aa15.55■□□□□ 0.08
SHMT2-205ENST00000553474 IL25Q9H293 177 aa15.55■□□□□ 0.08
SHMT2-205ENST00000553474 BICC1Q9H694 974 aaKnown RBP15.55■□□□□ 0.08
SHMT2-205ENST00000553474 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
SHMT2-205ENST00000553474 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 ZSCAN23Q3MJ62 389 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 CWC27Q6UX04 472 aaKnown RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 BARGINQ6ZT62 677 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 AACSQ86V21 672 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 TICAM2Q86XR7 235 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 NFATC2IPQ8NCF5 419 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 UPF3BQ9BZI7 483 aaKnown RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 LIMCH1Q9UPQ0 1083 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 ARFGEF2Q9Y6D5 1785 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 TNS2Q63HR2 1409 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 PRPF40AO75400 957 aaKnown RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 RBM6P78332 1123 aaKnown RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 VPS53Q5VIR6 699 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 ANKRD13DQ6ZTN6 518 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 TRIM44Q96DX7 344 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
SHMT2-205ENST00000553474 COPRSQ9NQ92 184 aa15.54■□□□□ 0.08
SHMT2-205ENST00000553474 RFX7Q2KHR2 1363 aa15.53■□□□□ 0.08
SHMT2-205ENST00000553474 SASH1O94885 1247 aa15.53■□□□□ 0.08
SHMT2-205ENST00000553474 MAP4K4O95819 1239 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-205ENST00000553474 ZKSCAN1P17029 563 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-205ENST00000553474 RXRBP28702 533 aa15.53■□□□□ 0.08
SHMT2-205ENST00000553474 CLCN1P35523 988 aa15.53■□□□□ 0.08
SHMT2-205ENST00000553474 CAVIN1Q6NZI2 390 aaKnown RBP15.53■□□□□ 0.08
SHMT2-205ENST00000553474 SYAP1Q96A49 352 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-205ENST00000553474 ZNF496Q96IT1 587 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-205ENST00000553474 ARXQ96QS3 562 aa15.53■□□□□ 0.08
SHMT2-205ENST00000553474 PPP1R9BQ96SB3 815 aa15.53■□□□□ 0.08
SHMT2-205ENST00000553474 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-205ENST00000553474 AIMP1Q12904 312 aaKnown RBP15.52■□□□□ 0.08
SHMT2-205ENST00000553474 DDB1Q16531 1140 aa15.52■□□□□ 0.08
SHMT2-205ENST00000553474 COPS6Q7L5N1 327 aa15.52■□□□□ 0.08
SHMT2-205ENST00000553474 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.08
SHMT2-205ENST00000553474 ZCRB1Q8TBF4 217 aaKnown RBP15.52■□□□□ 0.08
SHMT2-205ENST00000553474 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.08
SHMT2-205ENST00000553474 CDCA7Q9BWT1 371 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-205ENST00000553474 ATP6V1DQ9Y5K8 247 aa15.52■□□□□ 0.08
SHMT2-205ENST00000553474 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.07
SHMT2-205ENST00000553474 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.07
SHMT2-205ENST00000553474 DDX54Q8TDD1 881 aaKnown RBP15.52■□□□□ 0.07
SHMT2-205ENST00000553474 PA2G4Q9UQ80 394 aaKnown RBP15.52■□□□□ 0.07
SHMT2-205ENST00000553474 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 UBR2Q8IWV8 1755 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 CYP27B1O15528 508 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 SLC39A6Q13433 755 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 TMEM87AQ8NBN3 555 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 GPT2Q8TD30 523 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 EAF2Q96CJ1 260 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-205ENST00000553474 ZSWIM6Q9HCJ5 1215 aa15.51■□□□□ 0.07
SHMT2-205ENST00000553474 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 EXOC5O00471 708 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
SHMT2-205ENST00000553474 PSMA5P28066 241 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 AK2P54819 239 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 NECTIN1Q15223 517 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 RNF20Q5VTR2 975 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 MAP4K1Q92918 833 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 CYP46A1Q9Y6A2 500 aa15.5■□□□□ 0.07
SHMT2-205ENST00000553474 PHF14O94880 888 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
SHMT2-205ENST00000553474 MYD88Q99836 296 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms