RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TOMM70O94826 608 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 TCIRG1Q13488 830 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 CCDC27Q2M243 656 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
ACTN1-207ENST00000553290 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
ACTN1-207ENST00000553290 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
ACTN1-207ENST00000553290 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
ACTN1-207ENST00000553290 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
ACTN1-207ENST00000553290 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
ACTN1-207ENST00000553290 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
ACTN1-207ENST00000553290 PLBD2Q8NHP8 589 aa16.79■□□□□ 0.28
ACTN1-207ENST00000553290 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
ACTN1-207ENST00000553290 HOXA10P31260 410 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-207ENST00000553290 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
ACTN1-207ENST00000553290 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-207ENST00000553290 RTKN2Q8IZC4 609 aa16.78■□□□□ 0.28
ACTN1-207ENST00000553290 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
ACTN1-207ENST00000553290 DPY19L2Q6NUT2 758 aa16.77■□□□□ 0.28
ACTN1-207ENST00000553290 NLRP10Q86W26 655 aa16.77■□□□□ 0.28
ACTN1-207ENST00000553290 RBM17Q96I25 401 aaKnown RBP16.77■□□□□ 0.28
ACTN1-207ENST00000553290 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
ACTN1-207ENST00000553290 RRAGCQ9HB90 399 aa16.77■□□□□ 0.28
ACTN1-207ENST00000553290 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-207ENST00000553290 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
ACTN1-207ENST00000553290 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
ACTN1-207ENST00000553290 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
ACTN1-207ENST00000553290 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
ACTN1-207ENST00000553290 HSPA6P17066 643 aa16.75■□□□□ 0.27
ACTN1-207ENST00000553290 GRIPAP1Q4V328 841 aa16.75■□□□□ 0.27
ACTN1-207ENST00000553290 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
ACTN1-207ENST00000553290 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
ACTN1-207ENST00000553290 VEGFAP15692 232 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-207ENST00000553290 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
ACTN1-207ENST00000553290 IL16Q14005 1332 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 PSMD1Q99460 953 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 ISCA1Q9BUE6 129 aa16.73■□□□□ 0.27
ACTN1-207ENST00000553290 PPEF1O14829 653 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-207ENST00000553290 RIC3Q7Z5B4 369 aa16.72■□□□□ 0.27
ACTN1-207ENST00000553290 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
ACTN1-207ENST00000553290 WDR90Q96KV7 1748 aa16.71■□□□□ 0.27
ACTN1-207ENST00000553290 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-207ENST00000553290 FSTL1Q12841 308 aa16.71■□□□□ 0.27
ACTN1-207ENST00000553290 TRIM28Q13263 835 aaKnown RBP16.71■□□□□ 0.27
ACTN1-207ENST00000553290 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
ACTN1-207ENST00000553290 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
ACTN1-207ENST00000553290 TMX4Q9H1E5 349 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-207ENST00000553290 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
ACTN1-207ENST00000553290 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-207ENST00000553290 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
ACTN1-207ENST00000553290 LAMB2P55268 1798 aa16.7■□□□□ 0.26
ACTN1-207ENST00000553290 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
ACTN1-207ENST00000553290 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
ACTN1-207ENST00000553290 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
ACTN1-207ENST00000553290 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
ACTN1-207ENST00000553290 BBOX1O75936 387 aa16.69■□□□□ 0.26
ACTN1-207ENST00000553290 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
ACTN1-207ENST00000553290 ABCC4O15439 1325 aa16.69■□□□□ 0.26
ACTN1-207ENST00000553290 POTECB2RU33 542 aa16.68■□□□□ 0.26
ACTN1-207ENST00000553290 DDNO94850 711 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-207ENST00000553290 APLP1P51693 650 aa16.68■□□□□ 0.26
ACTN1-207ENST00000553290 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-207ENST00000553290 FAM9BQ8IZU0 186 aa16.68■□□□□ 0.26
ACTN1-207ENST00000553290 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
ACTN1-207ENST00000553290 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
ACTN1-207ENST00000553290 ATP6V0A2Q9Y487 856 aa16.68■□□□□ 0.26
ACTN1-207ENST00000553290 TCERG1O14776 1098 aaKnown RBP16.67■□□□□ 0.26
ACTN1-207ENST00000553290 JDP2Q8WYK2 163 aa16.67■□□□□ 0.26
ACTN1-207ENST00000553290 FAM89AQ96GI7 184 aa16.67■□□□□ 0.26
ACTN1-207ENST00000553290 SALL2Q9Y467 1007 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-207ENST00000553290 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
ACTN1-207ENST00000553290 FZD9O00144 591 aa16.66■□□□□ 0.26
ACTN1-207ENST00000553290 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
ACTN1-207ENST00000553290 TMC4Q7Z404 712 aa16.66■□□□□ 0.26
ACTN1-207ENST00000553290 SP8Q8IXZ3 490 aa16.66■□□□□ 0.26
ACTN1-207ENST00000553290 CCDC191Q8NCU4 936 aa16.66■□□□□ 0.26
ACTN1-207ENST00000553290 ZNF428Q96B54 188 aa16.66■□□□□ 0.26
ACTN1-207ENST00000553290 MYD88Q99836 296 aa16.66■□□□□ 0.26
ACTN1-207ENST00000553290 METTL22Q9BUU2 404 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-207ENST00000553290 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
ACTN1-207ENST00000553290 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-207ENST00000553290 GRAPQ13588 217 aa16.65■□□□□ 0.26
ACTN1-207ENST00000553290 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
ACTN1-207ENST00000553290 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-207ENST00000553290 GRAPLQ8TC17 118 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-207ENST00000553290 L3MBTL3Q96JM7 780 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-207ENST00000553290 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
ACTN1-207ENST00000553290 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
ACTN1-207ENST00000553290 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
ACTN1-207ENST00000553290 SUPT20HQ8NEM7 779 aa16.64■□□□□ 0.25
ACTN1-207ENST00000553290 MAP3K2Q9Y2U5 619 aa16.64■□□□□ 0.25
ACTN1-207ENST00000553290 ZNF541Q9H0D2 1346 aa16.64■□□□□ 0.25
ACTN1-207ENST00000553290 SCN4AP35499 1836 aa16.63■□□□□ 0.25
ACTN1-207ENST00000553290 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms