RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 ATP2B4P23634 1241 aa9.33□□□□□ -0.92
ATXN3-217ENST00000553287 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
ATXN3-217ENST00000553287 NAA30Q147X3 362 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-217ENST00000553287 SLCO4C1Q6ZQN7 724 aa9.33□□□□□ -0.92
ATXN3-217ENST00000553287 SYT9Q86SS6 491 aa9.33□□□□□ -0.92
ATXN3-217ENST00000553287 IFT43Q96FT9 208 aa9.33□□□□□ -0.92
ATXN3-217ENST00000553287 MICAL2O94851 1124 aa9.32□□□□□ -0.92
ATXN3-217ENST00000553287 EPXP11678 715 aa9.32□□□□□ -0.92
ATXN3-217ENST00000553287 COL26A1Q96A83 441 aa9.32□□□□□ -0.92
ATXN3-217ENST00000553287 SCARF2Q96GP6 870 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-217ENST00000553287 BTBD6Q96KE9 485 aa9.32□□□□□ -0.92
ATXN3-217ENST00000553287 SAP130Q9H0E3 1048 aa9.32□□□□□ -0.92
ATXN3-217ENST00000553287 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
ATXN3-217ENST00000553287 AMPD1P23109 780 aa9.31□□□□□ -0.92
ATXN3-217ENST00000553287 IDH3AP50213 366 aa9.31□□□□□ -0.92
ATXN3-217ENST00000553287 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
ATXN3-217ENST00000553287 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
ATXN3-217ENST00000553287 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
ATXN3-217ENST00000553287 BEND7Q8N7W2 519 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-217ENST00000553287 CNTNAP5Q8WYK1 1306 aa9.31□□□□□ -0.92
ATXN3-217ENST00000553287 INPP5BP32019 993 aa9.3□□□□□ -0.92
ATXN3-217ENST00000553287 RAB44Q7Z6P3 723 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-217ENST00000553287 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
ATXN3-217ENST00000553287 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
ATXN3-217ENST00000553287 OPLAHO14841 1288 aa9.29□□□□□ -0.92
ATXN3-217ENST00000553287 SIN3BO75182 1162 aa9.29□□□□□ -0.92
ATXN3-217ENST00000553287 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
ATXN3-217ENST00000553287 EPB42P16452 691 aa9.28□□□□□ -0.92
ATXN3-217ENST00000553287 BRD2P25440 801 aaKnown RBP9.28□□□□□ -0.92
ATXN3-217ENST00000553287 BHMTQ93088 406 aa9.28□□□□□ -0.92
ATXN3-217ENST00000553287 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
ATXN3-217ENST00000553287 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
ATXN3-217ENST00000553287 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-217ENST00000553287 ALAS2P22557 587 aa9.27□□□□□ -0.93
ATXN3-217ENST00000553287 IRS1P35568 1242 aa9.27□□□□□ -0.93
ATXN3-217ENST00000553287 ARSDP51689 593 aa9.27□□□□□ -0.93
ATXN3-217ENST00000553287 SNRPNP63162 240 aaKnown RBP9.27□□□□□ -0.93
ATXN3-217ENST00000553287 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
ATXN3-217ENST00000553287 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
ATXN3-217ENST00000553287 CCINQ13939 588 aa9.26□□□□□ -0.93
ATXN3-217ENST00000553287 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
ATXN3-217ENST00000553287 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-217ENST00000553287 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-217ENST00000553287 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 SSFA2P28290 1259 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 GRNP28799 593 aaKnown RBP9.25□□□□□ -0.93
ATXN3-217ENST00000553287 RASSF7Q02833 373 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 ELOA3BQ3SY89 546 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 CHSY3Q70JA7 882 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 ETFBKMTQ8IXQ9 262 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 ELOA3Q8NG57 546 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 PNMA5Q96PV4 448 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 IGFLR1Q9H665 355 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 USP20Q9Y2K6 914 aa9.25□□□□□ -0.93
ATXN3-217ENST00000553287 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
ATXN3-217ENST00000553287 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
ATXN3-217ENST00000553287 TNFRSF10BO14763 440 aa9.24□□□□□ -0.93
ATXN3-217ENST00000553287 SCNN1AP37088 669 aa9.24□□□□□ -0.93
ATXN3-217ENST00000553287 GSK3AP49840 483 aa9.24□□□□□ -0.93
ATXN3-217ENST00000553287 RGL4Q8IZJ4 473 aa9.24□□□□□ -0.93
ATXN3-217ENST00000553287 CMTR1Q8N1G2 835 aaKnown RBP9.24□□□□□ -0.93
ATXN3-217ENST00000553287 TNFRSF25Q93038 417 aa9.24□□□□□ -0.93
ATXN3-217ENST00000553287 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-217ENST00000553287 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-217ENST00000553287 FAM26DQ5JW98 314 aa9.23□□□□□ -0.93
ATXN3-217ENST00000553287 STIM2Q9P246 746 aa9.23□□□□□ -0.93
ATXN3-217ENST00000553287 MKL2Q9ULH7 1088 aa9.23□□□□□ -0.93
ATXN3-217ENST00000553287 GDF11O95390 407 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 NFKB1P19838 968 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 TARSP26639 723 aaKnown RBP9.22□□□□□ -0.93
ATXN3-217ENST00000553287 TBC1D8BQ0IIM8 1120 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 KANK3Q6NY19 840 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 LINC00114Q6XXX2 140 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 TMEM151AQ8N4L1 468 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 MDFIQ99750 246 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 C11orf16Q9NQ32 467 aa9.22□□□□□ -0.93
ATXN3-217ENST00000553287 SASH3O75995 380 aa9.21□□□□□ -0.94
ATXN3-217ENST00000553287 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
ATXN3-217ENST00000553287 ZBTB39O15060 712 aa9.2□□□□□ -0.94
ATXN3-217ENST00000553287 ADH7P40394 386 aa9.2□□□□□ -0.94
ATXN3-217ENST00000553287 UBE2OQ9C0C9 1292 aaKnown RBP9.2□□□□□ -0.94
ATXN3-217ENST00000553287 XYLBO75191 536 aa9.19□□□□□ -0.94
ATXN3-217ENST00000553287 PHLDB3Q6NSJ2 640 aa9.19□□□□□ -0.94
ATXN3-217ENST00000553287 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-217ENST00000553287 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
ATXN3-217ENST00000553287 ZFATQ9P243 1243 aa9.19□□□□□ -0.94
ATXN3-217ENST00000553287 USTQ9Y2C2 406 aa9.19□□□□□ -0.94
ATXN3-217ENST00000553287 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 ZAP70P43403 619 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 DGKGP49619 791 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 ABTB2Q8N961 1025 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 KCNMB2Q9Y691 235 aa9.18□□□□□ -0.94
ATXN3-217ENST00000553287 PIK3R2O00459 728 aa9.17□□□□□ -0.94
ATXN3-217ENST00000553287 GNB5O14775 395 aa9.17□□□□□ -0.94
ATXN3-217ENST00000553287 EGFRP00533 1210 aa9.17□□□□□ -0.94
ATXN3-217ENST00000553287 RARAP10276 462 aa9.17□□□□□ -0.94
ATXN3-217ENST00000553287 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms