RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 ITFG2Q969R8 447 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 KCNF1Q9H3M0 494 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 RBM28Q9NW13 759 aaKnown RBP9.48□□□□□ -0.89
ERBB3-221ENST00000553131 FAM177BA6PVY3 158 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 SGSM2O43147 1006 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 FLIIQ13045 1269 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 CCDC30Q5VVM6 783 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 TECPR2O15040 1411 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 DIP2AQ14689 1571 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 TTC21BQ7Z4L5 1316 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 IL25Q9H293 177 aa9.48□□□□□ -0.89
ERBB3-221ENST00000553131 LRRFIP2Q9Y608 721 aaKnown RBP9.48□□□□□ -0.89
ERBB3-221ENST00000553131 CHD2O14647 1828 aaKnown RBP9.47□□□□□ -0.89
ERBB3-221ENST00000553131 SOS1Q07889 1333 aaPredicted RBP9.47□□□□□ -0.89
ERBB3-221ENST00000553131 CTIFO43310 598 aaKnown RBP9.47□□□□□ -0.89
ERBB3-221ENST00000553131 CNTROBQ8N137 903 aa9.47□□□□□ -0.89
ERBB3-221ENST00000553131 SPC24Q8NBT2 197 aa9.47□□□□□ -0.89
ERBB3-221ENST00000553131 ZSCAN31Q96LW9 406 aaPredicted RBP9.47□□□□□ -0.89
ERBB3-221ENST00000553131 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
ERBB3-221ENST00000553131 MPHOSPH10O00566 681 aaKnown RBP9.47□□□□□ -0.89
ERBB3-221ENST00000553131 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
ERBB3-221ENST00000553131 FEZ1Q99689 392 aa9.47□□□□□ -0.89
ERBB3-221ENST00000553131 AP5Z1O43299 807 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 UBTFL1P0CB47 393 aaPredicted RBP9.46□□□□□ -0.89
ERBB3-221ENST00000553131 DNM1Q05193 864 aaKnown RBP9.46□□□□□ -0.89
ERBB3-221ENST00000553131 FAM200AQ8TCP9 573 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 LSG1Q9H089 658 aaKnown RBP9.46□□□□□ -0.89
ERBB3-221ENST00000553131 NCKAP5LQ9HCH0 1330 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 GOLGA6CA6NDK9 693 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 GOLGA6BA6NDN3 693 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 GOLGA6DP0CG33 693 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 GJB2P29033 226 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 SSH3Q8TE77 659 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 TIGD1Q96MW7 591 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.89
ERBB3-221ENST00000553131 GOLGA6AQ9NYA3 693 aa9.46□□□□□ -0.89
ERBB3-221ENST00000553131 NRDCO43847 1150 aa9.46□□□□□ -0.9
ERBB3-221ENST00000553131 MTHFSDQ2M296 383 aaKnown RBP9.46□□□□□ -0.9
ERBB3-221ENST00000553131 HSP90AB2PQ58FF8 381 aa9.46□□□□□ -0.9
ERBB3-221ENST00000553131 ZC3H12AQ5D1E8 599 aaKnown RBP9.46□□□□□ -0.9
ERBB3-221ENST00000553131 RASEFQ8IZ41 740 aa9.46□□□□□ -0.9
ERBB3-221ENST00000553131 MTMR6Q9Y217 621 aa9.46□□□□□ -0.9
ERBB3-221ENST00000553131 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 MAP4K4O95819 1239 aaPredicted RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 CASTP20810 708 aaKnown RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 SYCP1Q15431 976 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 DDX46Q7L014 1031 aaKnown RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 PI4K2BQ8TCG2 481 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 A2ML1A8K2U0 1454 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 PXDNLA1KZ92 1463 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 DHX16O60231 1041 aaKnown RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 MAP3K11Q16584 847 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 VPS53Q5VIR6 699 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 CCDC83Q8IWF9 413 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 ATL2Q8NHH9 583 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 RUFY2Q8WXA3 655 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
ERBB3-221ENST00000553131 HYPKQ9NX55 129 aa9.45□□□□□ -0.9
ERBB3-221ENST00000553131 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.94e-29■■□□□ 11.6
ERBB3-221ENST00000553131 KRT85P78386 507 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 ZNF771Q7L3S4 317 aaPredicted RBP9.44□□□□□ -0.9
ERBB3-221ENST00000553131 RHPN1Q8TCX5 695 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 KIF1BPQ96EK5 621 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 USP44Q9H0E7 712 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 NUP62CLQ9H1M0 184 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 PDRG1Q9NUG6 133 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
ERBB3-221ENST00000553131 FOXO3O43524 673 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 PTGS1P23219 599 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 TDO2P48775 406 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 NME8Q8N427 588 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 DONSONQ9NYP3 566 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 OVOS2A0A0J9YW53 1432 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 OVOS2Q6IE36 1432 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 CCDC66A2RUB6 948 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 HTATSF1O43719 755 aaKnown RBP9.44□□□□□ -0.9
ERBB3-221ENST00000553131 CWC27Q6UX04 472 aaKnown RBP9.44□□□□□ -0.9
ERBB3-221ENST00000553131 CCDC97Q96F63 343 aaPredicted RBP9.44□□□□□ -0.9
ERBB3-221ENST00000553131 TM6SF1Q9BZW5 370 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 CYP46A1Q9Y6A2 500 aa9.44□□□□□ -0.9
ERBB3-221ENST00000553131 MAP3K19Q56UN5 1328 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 DNAJC21Q5F1R6 531 aaKnown RBP9.43□□□□□ -0.9
ERBB3-221ENST00000553131 DRC7Q8IY82 874 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 ELP1O95163 1332 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 LARGE1O95461 756 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 CCT2P78371 535 aaKnown RBP9.43□□□□□ -0.9
ERBB3-221ENST00000553131 TYRO3Q06418 890 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 POLA2Q14181 598 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 C1QTNF12Q5T7M4 302 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 PPP1R42Q7Z4L9 355 aa9.43□□□□□ -0.9
ERBB3-221ENST00000553131 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms