RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 PTPN12Q05209 780 aaKnown RBP11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 CCDC191Q8NCU4 936 aa11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 IL25Q9H293 177 aa11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 MCCP23508 829 aa11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 CWC27Q6UX04 472 aaKnown RBP11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
RAB3IP-218ENST00000553099 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 H7C1W4 665 aa11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 THRAP3Q9Y2W1 955 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 TFCP2Q12800 502 aa11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 DIAPH3Q9NSV4 1193 aa11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
RAB3IP-218ENST00000553099 SPATA31A5Q5VU36 1347 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 SPATA31A7Q8IWB4 1347 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 ST18O60284 1047 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 FOXO4P98177 505 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 TCIRG1Q13488 830 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 BOLA2Q9H3K6 86 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 GPTP24298 496 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 COL15A1P39059 1388 aa11.04□□□□□ -0.64
RAB3IP-218ENST00000553099 MARCH10Q8NA82 808 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 FAM89AQ96GI7 184 aa11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 PALD1Q9ULE6 856 aa11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 FAM98CQ17RN3 349 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 SLIT2O94813 1529 aa11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 NUP98P52948 1817 aa11.03□□□□□ -0.64
RAB3IP-218ENST00000553099 SGSM2O43147 1006 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 NEK4P51957 841 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 HLFQ16534 295 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 TNNI3KQ59H18 835 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 KIAA1211Q6ZU35 1233 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 EVI5LQ96CN4 794 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 ISCA1Q9BUE6 129 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 FPGT-TNNI3KV9GXZ4 949 aa11.02□□□□□ -0.64
RAB3IP-218ENST00000553099 DEKP35659 375 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 DBNLQ9UJU6 430 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 NOL8Q76FK4 1167 aaKnown RBP11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 FSD1Q9BTV5 496 aa11.02□□□□□ -0.65
RAB3IP-218ENST00000553099 ANKRD36CQ5JPF3 1778 aa11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 RUFY2Q8WXA3 655 aa11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 NEUROD6Q96NK8 337 aa11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 CCDC57Q2TAC2 916 aa11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 DBNDD2Q9BQY9 259 aa11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-218ENST00000553099 RAD50Q92878 1312 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 LRRC24Q50LG9 513 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 TAF7LQ5H9L4 462 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 BARGINQ6ZT62 677 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 SYNE4Q8N205 404 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 DNAJC2Q99543 621 aaKnown RBP11□□□□□ -0.65
RAB3IP-218ENST00000553099 MYH3P11055 1940 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 KCNQ2O43526 872 aa11□□□□□ -0.65
RAB3IP-218ENST00000553099 ZBTB38Q8NAP3 1195 aaPredicted RBP11□□□□□ -0.65
RAB3IP-218ENST00000553099 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 PCCAP05165 728 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 SIK1P57059 783 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 ANAPC15P60006 121 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 FAM227BQ96M60 508 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 PUS3Q9BZE2 481 aaKnown RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 LSG1Q9H089 658 aaKnown RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 JCADQ9P266 1359 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 HSPA4P34932 840 aa10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 IL6STP40189 918 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 IL15P40933 162 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 TRMT112Q9UI30 125 aaKnown RBP10.99□□□□□ -0.65
RAB3IP-218ENST00000553099 PALLDQ8WX93 1383 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 MYH14Q7Z406 1995 aaKnown RBP10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 EYA2O00167 538 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 DDIT3P35638 169 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 CRKLP46109 303 aaKnown RBP10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 TIMM10P62072 90 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 TRIM28Q13263 835 aaKnown RBP10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 NLRP10Q86W26 655 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 HIP1O00291 1037 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 KCNJ4P48050 445 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 CCDC87Q9NVE4 849 aa10.98□□□□□ -0.65
RAB3IP-218ENST00000553099 A0A0D9SFI3 127 aa10.97□□□□□ -0.65
RAB3IP-218ENST00000553099 ATP5JP18859 108 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms