RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 A0A1W2PP64 1363 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
CKAP4-203ENST00000553039 CASP8AP2Q9UKL3 1982 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 PPP1R37O75864 691 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 STARD3NLO95772 234 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 CYP19A1P11511 503 aaPredicted RBP7.15□□□□□ -1.26
CKAP4-203ENST00000553039 NPR1P16066 1061 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 EPS15P42566 896 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 FMR1Q06787 632 aaKnown RBP eCLIP7.15□□□□□ -1.26
CKAP4-203ENST00000553039 MFSD10Q14728 455 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 INTS3Q68E01 1043 aaKnown RBP7.15□□□□□ -1.26
CKAP4-203ENST00000553039 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 DNAJC10Q8IXB1 793 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 BCL2L12Q9HB09 334 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 ADARB2Q9NS39 739 aaKnown RBP7.15□□□□□ -1.26
CKAP4-203ENST00000553039 SOS1Q07889 1333 aaPredicted RBP7.15□□□□□ -1.26
CKAP4-203ENST00000553039 ZNF541Q9H0D2 1346 aa7.15□□□□□ -1.26
CKAP4-203ENST00000553039 LTN1O94822 1766 aa7.15□□□□□ -1.27
CKAP4-203ENST00000553039 SCN4AP35499 1836 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 HUNKP57058 714 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 KIF23Q02241 960 aaPredicted RBP7.14□□□□□ -1.27
CKAP4-203ENST00000553039 PRR5LQ6MZQ0 368 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 RGMBQ6NW40 437 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 C2orf69Q8N8R5 385 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 CNBD1Q8NA66 436 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 CARD11Q9BXL7 1154 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 ZNF408Q9H9D4 720 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 PGAP2Q9UHJ9 254 aa7.14□□□□□ -1.27
CKAP4-203ENST00000553039 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 PSEN1P49768 467 aa7.13□□□□□ -1.27
CKAP4-203ENST00000553039 ZNF157P51786 506 aaPredicted RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 TBC1D9BQ66K14 1250 aa7.13□□□□□ -1.27
CKAP4-203ENST00000553039 ZNF530Q6P9A1 599 aaPredicted RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 FBXO46Q6PJ61 603 aaPredicted RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 TPTE2Q6XPS3 522 aa7.13□□□□□ -1.27
CKAP4-203ENST00000553039 ZNF579Q8NAF0 562 aaKnown RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 PSMD1Q99460 953 aa7.13□□□□□ -1.27
CKAP4-203ENST00000553039 TEX13AQ9BXU3 409 aaPredicted RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 TMX4Q9H1E5 349 aaPredicted RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 MAP2P11137 1827 aaKnown RBP7.13□□□□□ -1.27
CKAP4-203ENST00000553039 CCDC24Q8N4L8 307 aa7.12□□□□□ -1.27
CKAP4-203ENST00000553039 CSRNP1Q96S65 589 aa7.12□□□□□ -1.27
CKAP4-203ENST00000553039 ZIC5Q96T25 663 aa7.12□□□□□ -1.27
CKAP4-203ENST00000553039 VPS33BQ9H267 617 aa7.12□□□□□ -1.27
CKAP4-203ENST00000553039 SCNN1DP51172 638 aa7.11□□□□□ -1.27
CKAP4-203ENST00000553039 EIF5P55010 431 aaKnown RBP7.11□□□□□ -1.27
CKAP4-203ENST00000553039 CAMK2BQ13554 666 aa7.11□□□□□ -1.27
CKAP4-203ENST00000553039 NBPF5PQ86XG9 351 aaPredicted RBP7.11□□□□□ -1.27
CKAP4-203ENST00000553039 LARGE2Q8N3Y3 721 aa7.11□□□□□ -1.27
CKAP4-203ENST00000553039 GLIS2Q9BZE0 524 aaPredicted RBP7.11□□□□□ -1.27
CKAP4-203ENST00000553039 GPRC5DQ9NZD1 345 aa7.11□□□□□ -1.27
CKAP4-203ENST00000553039 COLQQ9Y215 455 aaPredicted RBP7.11□□□□□ -1.27
CKAP4-203ENST00000553039 EMILIN1Q9Y6C2 1016 aa7.11□□□□□ -1.27
CKAP4-203ENST00000553039 COL15A1P39059 1388 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 CARMIL3Q8ND23 1372 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 KLRG2A4D1S0 409 aaPredicted RBP7.1□□□□□ -1.27
CKAP4-203ENST00000553039 H7C1D1 291 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 PDE4AP27815 886 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 GTF2E1P29083 439 aaPredicted RBP7.1□□□□□ -1.27
CKAP4-203ENST00000553039 TRIM26Q12899 539 aaPredicted RBP7.1□□□□□ -1.27
CKAP4-203ENST00000553039 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 KDM4CQ9H3R0 1056 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 GBA2Q9HCG7 927 aaPredicted RBP7.1□□□□□ -1.27
CKAP4-203ENST00000553039 PCDHB8Q9UN66 801 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 TBC1D2BQ9UPU7 963 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 ZBTB1Q9Y2K1 713 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 PCDHB13Q9Y5F0 798 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 CCDC88AQ3V6T2 1871 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 ITGB4P16144 1822 aa7.1□□□□□ -1.27
CKAP4-203ENST00000553039 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
CKAP4-203ENST00000553039 PITPNM2Q9BZ72 1349 aa7.09□□□□□ -1.27
CKAP4-203ENST00000553039 FAM155AB1AL88 458 aaPredicted RBP7.09□□□□□ -1.27
CKAP4-203ENST00000553039 TNIP1Q15025 636 aa7.09□□□□□ -1.27
CKAP4-203ENST00000553039 NOM1Q5C9Z4 860 aaKnown RBP7.09□□□□□ -1.27
CKAP4-203ENST00000553039 CLEC4GQ6UXB4 293 aa7.09□□□□□ -1.27
CKAP4-203ENST00000553039 BCL2L13Q9BXK5 485 aa7.09□□□□□ -1.27
CKAP4-203ENST00000553039 CRISPLD2Q9H0B8 497 aa7.09□□□□□ -1.27
CKAP4-203ENST00000553039 MON2Q7Z3U7 1717 aa7.08□□□□□ -1.28
CKAP4-203ENST00000553039 IL6STP40189 918 aaPredicted RBP7.08□□□□□ -1.28
CKAP4-203ENST00000553039 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
CKAP4-203ENST00000553039 TTC5Q8N0Z6 440 aa7.08□□□□□ -1.28
CKAP4-203ENST00000553039 ZNF296Q8WUU4 475 aaPredicted RBP7.08□□□□□ -1.28
CKAP4-203ENST00000553039 DCPSQ96C86 337 aaKnown RBP7.08□□□□□ -1.28
CKAP4-203ENST00000553039 TMEM106CQ9BVX2 250 aa7.08□□□□□ -1.28
CKAP4-203ENST00000553039 SLC52A2Q9HAB3 445 aa7.08□□□□□ -1.28
CKAP4-203ENST00000553039 ZNF652Q9Y2D9 606 aa7.08□□□□□ -1.28
CKAP4-203ENST00000553039 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
CKAP4-203ENST00000553039 DICER1Q9UPY3 1922 aaKnown RBP7.07□□□□□ -1.28
CKAP4-203ENST00000553039 GPR25O00155 361 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 EIF4A2Q14240 407 aaKnown RBP7.07□□□□□ -1.28
CKAP4-203ENST00000553039 ANKRD13DQ6ZTN6 518 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 SUPT20HQ8NEM7 779 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 IL27Q8NEV9 243 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 LARP6Q9BRS8 491 aaKnown RBP7.07□□□□□ -1.28
CKAP4-203ENST00000553039 POLKQ9UBT6 870 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 CNOT7Q9UIV1 285 aaKnown RBP7.07□□□□□ -1.28
CKAP4-203ENST00000553039 ZNRF3Q9ULT6 936 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 TIAM2Q8IVF5 1701 aa7.07□□□□□ -1.28
CKAP4-203ENST00000553039 ZNF831Q5JPB2 1677 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms