RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 KCNA4P22459 653 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 PDE6BP35913 854 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 FLIIQ13045 1269 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 CCDC88AQ3V6T2 1871 aa15□□□□□ -0.01
TRAFD1-209ENST00000552896 A0A0G2JLW4 131 aa15□□□□□ -0.01
TRAFD1-209ENST00000552896 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
TRAFD1-209ENST00000552896 RIC3Q7Z5B4 369 aa15□□□□□ -0.01
TRAFD1-209ENST00000552896 NLRP10Q86W26 655 aa15□□□□□ -0.01
TRAFD1-209ENST00000552896 ISCA1Q9BUE6 129 aa15□□□□□ -0.01
TRAFD1-209ENST00000552896 FAM177BA6PVY3 158 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 YBX3P16989 372 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■□ 20.1
TRAFD1-209ENST00000552896 KCNA3P22001 575 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 CHRNA5P30532 468 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 GPR162Q16538 588 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 SUSD4Q5VX71 490 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 KSR2Q6VAB6 950 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 G2E3Q7L622 706 aa14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 UTP14AQ9BVJ6 771 aaKnown RBP14.99□□□□□ -0.01
TRAFD1-209ENST00000552896 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 TAF1P21675 1872 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 PI4KAP2A4QPH2 592 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 H0YIN7 160 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 TRIM28Q13263 835 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 NUTM1Q86Y26 1132 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 PI4KAP1Q8N8J0 262 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 PIM2Q9P1W9 311 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 MAP3K2Q9Y2U5 619 aa14.98□□□□□ -0.01
TRAFD1-209ENST00000552896 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 SPEF2Q9C093 1822 aa14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 KLRG2A4D1S0 409 aaPredicted RBP14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 GTF2E1P29083 439 aaPredicted RBP14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 FKBP5Q13451 457 aaPredicted RBP14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 ERFEQ4G0M1 354 aa14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
TRAFD1-209ENST00000552896 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 GRIN3BO60391 1043 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 SRGNP10124 158 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 CRY2Q49AN0 593 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 STYK1Q6J9G0 422 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 MYD88Q99836 296 aa14.96□□□□□ -0.01
TRAFD1-209ENST00000552896 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
TRAFD1-209ENST00000552896 DALRD3Q5D0E6 543 aaKnown RBP14.95□□□□□ -0.02
TRAFD1-209ENST00000552896 CCDC191Q8NCU4 936 aa14.95□□□□□ -0.02
TRAFD1-209ENST00000552896 TRMT112Q9UI30 125 aaKnown RBP14.95□□□□□ -0.02
TRAFD1-209ENST00000552896 WWC3Q9ULE0 1092 aa14.95□□□□□ -0.02
TRAFD1-209ENST00000552896 BCS1LQ9Y276 419 aa14.95□□□□□ -0.02
TRAFD1-209ENST00000552896 NPR1P16066 1061 aa14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 MRPL50Q8N5N7 158 aaKnown RBP14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 TTLL6Q8N841 843 aa14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 DNAAF4Q8WXU2 420 aa14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 MASTLQ96GX5 879 aa14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 CWC25Q9NXE8 425 aaPredicted RBP14.94□□□□□ -0.02
TRAFD1-209ENST00000552896 PTPRCP08575 1304 aa14.93□□□□□ -0.02
TRAFD1-209ENST00000552896 SLC10A5Q5PT55 438 aa14.93□□□□□ -0.02
TRAFD1-209ENST00000552896 CNKSR1Q969H4 720 aa14.93□□□□□ -0.02
TRAFD1-209ENST00000552896 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
TRAFD1-209ENST00000552896 NEURL1BA8MQ27 555 aa14.92□□□□□ -0.02
TRAFD1-209ENST00000552896 PCCAP05165 728 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-209ENST00000552896 IGKV5-2P06315 115 aa14.92□□□□□ -0.02
TRAFD1-209ENST00000552896 ZBTB38Q8NAP3 1195 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-209ENST00000552896 ZNF622Q969S3 477 aaKnown RBP eCLIP14.92□□□□□ -0.022e-7■■□□□ 11.8
TRAFD1-209ENST00000552896 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
TRAFD1-209ENST00000552896 HSP90B1P14625 803 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 BRPF1P55201 1214 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 PRPF40BQ6NWY9 871 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 LINS1Q8NG48 757 aa14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 RPGRQ92834 1020 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 NLRP3Q96P20 1036 aa14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 BCL2L13Q9BXK5 485 aa14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 KIF16BQ96L93 1317 aa14.91□□□□□ -0.02
TRAFD1-209ENST00000552896 A0A1B0GUL6 1792 aa14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 LTBP1Q14766 1721 aa14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 HOXA10P31260 410 aaPredicted RBP14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 RARSP54136 660 aaKnown RBP14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 CWF19L2Q2TBE0 894 aaKnown RBP14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 C3orf67Q6ZVT6 689 aa14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 SYNE4Q8N205 404 aa14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 FAM89AQ96GI7 184 aa14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 COL4A1P02462 1669 aa14.9□□□□□ -0.02
TRAFD1-209ENST00000552896 F6X3S4 739 aa14.89□□□□□ -0.03
TRAFD1-209ENST00000552896 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
TRAFD1-209ENST00000552896 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 GCKRQ14397 625 aa14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 BEND3Q5T5X7 828 aa14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 SOGA3Q5TF21 947 aa14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 RBM17Q96I25 401 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
TRAFD1-209ENST00000552896 ALDH1L1O75891 902 aa14.87□□□□□ -0.03
TRAFD1-209ENST00000552896 RTL5Q5HYW3 569 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms