RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 CAMTA2O94983 1202 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
MMP19-209ENST00000552872 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
MMP19-209ENST00000552872 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
MMP19-209ENST00000552872 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
MMP19-209ENST00000552872 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
MMP19-209ENST00000552872 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
MMP19-209ENST00000552872 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 IGHDP01880 384 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 RFC4P35249 363 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 CCT4P50991 539 aaKnown RBP12.67□□□□□ -0.38
MMP19-209ENST00000552872 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 FAM89AQ96GI7 184 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 NAP1L5Q96NT1 182 aaPredicted RBP12.67□□□□□ -0.38
MMP19-209ENST00000552872 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
MMP19-209ENST00000552872 RREB1Q92766 1687 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 BAG6P46379 1132 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 TRAPPC3LQ5T215 181 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
MMP19-209ENST00000552872 A0A087WZG4 1122 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
MMP19-209ENST00000552872 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 APBB1O00213 710 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 ZPR1O75312 459 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
MMP19-209ENST00000552872 GCKRQ14397 625 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
MMP19-209ENST00000552872 COL23A1Q86Y22 540 aaPredicted RBP12.66□□□□□ -0.38
MMP19-209ENST00000552872 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
MMP19-209ENST00000552872 NIP7Q9Y221 180 aaKnown RBP eCLIP12.66□□□□□ -0.38
MMP19-209ENST00000552872 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
MMP19-209ENST00000552872 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
MMP19-209ENST00000552872 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
MMP19-209ENST00000552872 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
MMP19-209ENST00000552872 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
MMP19-209ENST00000552872 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
MMP19-209ENST00000552872 SUCLG2Q96I99 432 aa12.65□□□□□ -0.38
MMP19-209ENST00000552872 GRM8O00222 908 aa12.64□□□□□ -0.39
MMP19-209ENST00000552872 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
MMP19-209ENST00000552872 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
MMP19-209ENST00000552872 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
MMP19-209ENST00000552872 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
MMP19-209ENST00000552872 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
MMP19-209ENST00000552872 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 NLRP10Q86W26 655 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 KLHDC4Q8TBB5 520 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 CWC25Q9NXE8 425 aaPredicted RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 N4BP2Q86UW6 1770 aaPredicted RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 HCLS1P14317 486 aaPredicted RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 NARFQ9UHQ1 456 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 CHMP3Q9Y3E7 222 aa12.63□□□□□ -0.39
MMP19-209ENST00000552872 USP42Q9H9J4 1324 aaKnown RBP12.63□□□□□ -0.39
MMP19-209ENST00000552872 ANKRD36CQ5JPF3 1778 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 BCORQ6W2J9 1755 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 C8orf34Q49A92 452 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
MMP19-209ENST00000552872 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 PXDNLA1KZ92 1463 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 GYS1P13807 737 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
MMP19-209ENST00000552872 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
MMP19-209ENST00000552872 GNAI2P04899 355 aa12.61□□□□□ -0.39
MMP19-209ENST00000552872 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
MMP19-209ENST00000552872 ZNF34Q8IZ26 560 aa12.61□□□□□ -0.39
MMP19-209ENST00000552872 ERVV-1B6SEH8 477 aa12.61□□□□□ -0.39
MMP19-209ENST00000552872 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
MMP19-209ENST00000552872 NFIXQ14938 502 aa12.61□□□□□ -0.39
MMP19-209ENST00000552872 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 TAF1P21675 1872 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 NPHP1O15259 732 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 SSFA2P28290 1259 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
MMP19-209ENST00000552872 ERFEQ4G0M1 354 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 STK32BQ9NY57 414 aa12.6□□□□□ -0.39
MMP19-209ENST00000552872 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
MMP19-209ENST00000552872 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 SIL1Q9H173 461 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 SRGAP3O43295 1099 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 GNAI3P08754 354 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 CASP7P55210 303 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
MMP19-209ENST00000552872 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
MMP19-209ENST00000552872 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
MMP19-209ENST00000552872 CLCN1P35523 988 aa12.58□□□□□ -0.4
MMP19-209ENST00000552872 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms