RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 CC2D2BQ6DHV5 1058 aa15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 PAXIP1Q6ZW49 1069 aaPredicted RBP15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 SAPCD2Q86UD0 394 aa15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 HHIPL1Q96JK4 782 aa15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
SUPT16H-202ENST00000552829 GNAT3A8MTJ3 354 aa15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 LMOD1P29536 600 aaPredicted RBP15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 GRM1Q13255 1194 aa15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 ZNF652Q9Y2D9 606 aa15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 KNSTRNQ9Y448 316 aa15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 GJA3Q9Y6H8 435 aa15.39■□□□□ 0.05
SUPT16H-202ENST00000552829 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
SUPT16H-202ENST00000552829 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
SUPT16H-202ENST00000552829 BRPF1P55201 1214 aaPredicted RBP15.38■□□□□ 0.05
SUPT16H-202ENST00000552829 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
SUPT16H-202ENST00000552829 HOXA10P31260 410 aaPredicted RBP15.37■□□□□ 0.05
SUPT16H-202ENST00000552829 DGKZQ13574 1117 aa15.37■□□□□ 0.05
SUPT16H-202ENST00000552829 PGAP2Q9UHJ9 254 aa15.37■□□□□ 0.05
SUPT16H-202ENST00000552829 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 GAS2L2Q8NHY3 880 aa15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
SUPT16H-202ENST00000552829 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
SUPT16H-202ENST00000552829 HLFQ16534 295 aa15.35■□□□□ 0.05
SUPT16H-202ENST00000552829 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
SUPT16H-202ENST00000552829 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
SUPT16H-202ENST00000552829 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 NUP98P52948 1817 aa15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 CIAPIN1Q6FI81 312 aa15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 LARGE2Q8N3Y3 721 aa15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 ADARB2Q9NS39 739 aaKnown RBP15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 RIC1Q4ADV7 1423 aa15.34■□□□□ 0.05
SUPT16H-202ENST00000552829 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
SUPT16H-202ENST00000552829 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
SUPT16H-202ENST00000552829 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
SUPT16H-202ENST00000552829 ZIC5Q96T25 663 aa15.33■□□□□ 0.04
SUPT16H-202ENST00000552829 KIF7Q2M1P5 1343 aa15.33■□□□□ 0.04
SUPT16H-202ENST00000552829 GLIS2Q9BZE0 524 aaPredicted RBP15.32■□□□□ 0.04
SUPT16H-202ENST00000552829 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
SUPT16H-202ENST00000552829 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
SUPT16H-202ENST00000552829 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
SUPT16H-202ENST00000552829 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 HIRAP54198 1017 aaPredicted RBP15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 CXCL9Q07325 125 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 NOGQ13253 232 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 NIM1KQ8IY84 436 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 ZC3H15Q8WU90 426 aaKnown RBP15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 NYXQ9GZU5 481 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
SUPT16H-202ENST00000552829 GTF2E1P29083 439 aaPredicted RBP15.29■□□□□ 0.04
SUPT16H-202ENST00000552829 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
SUPT16H-202ENST00000552829 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
SUPT16H-202ENST00000552829 AKAP11Q9UKA4 1901 aa15.28■□□□□ 0.04
SUPT16H-202ENST00000552829 ERVV-1B6SEH8 477 aa15.28■□□□□ 0.04
SUPT16H-202ENST00000552829 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
SUPT16H-202ENST00000552829 RPGRQ92834 1020 aaKnown RBP15.28■□□□□ 0.04
SUPT16H-202ENST00000552829 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
SUPT16H-202ENST00000552829 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 FAM155AB1AL88 458 aaPredicted RBP15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 SOX10P56693 466 aa15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 RTFDC1Q9BY42 306 aaPredicted RBP15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 SAGE1Q9NXZ1 904 aa15.27■□□□□ 0.04
SUPT16H-202ENST00000552829 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
SUPT16H-202ENST00000552829 U2SURPO15042 1029 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-202ENST00000552829 AOC3Q16853 763 aa15.26■□□□□ 0.03
SUPT16H-202ENST00000552829 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
SUPT16H-202ENST00000552829 RBM17Q96I25 401 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-202ENST00000552829 UBN2Q6ZU65 1347 aa15.25■□□□□ 0.03
SUPT16H-202ENST00000552829 HUNKP57058 714 aa15.25■□□□□ 0.03
SUPT16H-202ENST00000552829 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
SUPT16H-202ENST00000552829 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
SUPT16H-202ENST00000552829 ATP6V0A2Q9Y487 856 aa15.25■□□□□ 0.03
SUPT16H-202ENST00000552829 LAMB4A4D0S4 1761 aa15.25■□□□□ 0.03
SUPT16H-202ENST00000552829 MAP3K15Q6ZN16 1313 aa15.24■□□□□ 0.03
SUPT16H-202ENST00000552829 ZNF408Q9H9D4 720 aa15.24■□□□□ 0.03
SUPT16H-202ENST00000552829 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
SUPT16H-202ENST00000552829 SUSD4Q5VX71 490 aa15.23■□□□□ 0.03
SUPT16H-202ENST00000552829 RGMBQ6NW40 437 aa15.23■□□□□ 0.03
SUPT16H-202ENST00000552829 MCM10Q7L590 875 aa15.23■□□□□ 0.03
SUPT16H-202ENST00000552829 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
SUPT16H-202ENST00000552829 ZNF34Q8IZ26 560 aa15.23■□□□□ 0.03
SUPT16H-202ENST00000552829 SHTN1A0MZ66 631 aa15.22■□□□□ 0.03
SUPT16H-202ENST00000552829 NTSR2O95665 410 aa15.22■□□□□ 0.03
SUPT16H-202ENST00000552829 PRKAR2BP31323 418 aa15.22■□□□□ 0.03
SUPT16H-202ENST00000552829 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
SUPT16H-202ENST00000552829 CC2D1BQ5T0F9 858 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms