RNA–Protein interactions for RNA: ENST00000552768.1

LINC02396-205, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 5

Gene LINC02396, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-205ENST00000552768 CCDC27Q2M243 656 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
LINC02396-205ENST00000552768 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 CCDC93Q567U6 631 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 HDGFL1Q5TGJ6 251 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 DPY19L2Q6NUT2 758 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.37
LINC02396-205ENST00000552768 CCDC88AQ3V6T2 1871 aa12.71□□□□□ -0.37
LINC02396-205ENST00000552768 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
LINC02396-205ENST00000552768 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
LINC02396-205ENST00000552768 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
LINC02396-205ENST00000552768 WWC1Q8IX03 1113 aa12.7□□□□□ -0.38
LINC02396-205ENST00000552768 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
LINC02396-205ENST00000552768 ARFGEF2Q9Y6D5 1785 aa12.7□□□□□ -0.38
LINC02396-205ENST00000552768 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
LINC02396-205ENST00000552768 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
LINC02396-205ENST00000552768 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC02396-205ENST00000552768 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
LINC02396-205ENST00000552768 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
LINC02396-205ENST00000552768 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
LINC02396-205ENST00000552768 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
LINC02396-205ENST00000552768 HYPKQ9NX55 129 aa12.69□□□□□ -0.38
LINC02396-205ENST00000552768 TNRC6CQ9HCJ0 1690 aaKnown RBP12.68□□□□□ -0.38
LINC02396-205ENST00000552768 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
LINC02396-205ENST00000552768 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
LINC02396-205ENST00000552768 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
LINC02396-205ENST00000552768 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
LINC02396-205ENST00000552768 UTP14AQ9BVJ6 771 aaKnown RBP12.68□□□□□ -0.38
LINC02396-205ENST00000552768 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
LINC02396-205ENST00000552768 DDNO94850 711 aaPredicted RBP12.67□□□□□ -0.38
LINC02396-205ENST00000552768 CC2D2BQ6DHV5 1058 aa12.67□□□□□ -0.38
LINC02396-205ENST00000552768 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
LINC02396-205ENST00000552768 PSMD1Q99460 953 aa12.67□□□□□ -0.38
LINC02396-205ENST00000552768 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
LINC02396-205ENST00000552768 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
LINC02396-205ENST00000552768 CEP350Q5VT06 3117 aa12.66□□□□□ -0.38
LINC02396-205ENST00000552768 TIAM2Q8IVF5 1701 aa12.66□□□□□ -0.38
LINC02396-205ENST00000552768 WDR90Q96KV7 1748 aa12.66□□□□□ -0.38
LINC02396-205ENST00000552768 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
LINC02396-205ENST00000552768 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
LINC02396-205ENST00000552768 TSPYL6Q8N831 410 aa12.66□□□□□ -0.38
LINC02396-205ENST00000552768 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
LINC02396-205ENST00000552768 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
LINC02396-205ENST00000552768 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
LINC02396-205ENST00000552768 IL16Q14005 1332 aa12.65□□□□□ -0.38
LINC02396-205ENST00000552768 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
LINC02396-205ENST00000552768 FZD9O00144 591 aa12.65□□□□□ -0.38
LINC02396-205ENST00000552768 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
LINC02396-205ENST00000552768 TRIM28Q13263 835 aaKnown RBP12.65□□□□□ -0.38
LINC02396-205ENST00000552768 GRIPAP1Q4V328 841 aa12.65□□□□□ -0.38
LINC02396-205ENST00000552768 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
LINC02396-205ENST00000552768 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
LINC02396-205ENST00000552768 PHAXQ9H814 394 aaKnown RBP12.65□□□□□ -0.38
LINC02396-205ENST00000552768 HTRA3P83110 453 aa12.64□□□□□ -0.39
LINC02396-205ENST00000552768 CCDC30Q5VVM6 783 aa12.64□□□□□ -0.39
LINC02396-205ENST00000552768 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
LINC02396-205ENST00000552768 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
LINC02396-205ENST00000552768 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
LINC02396-205ENST00000552768 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
LINC02396-205ENST00000552768 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
LINC02396-205ENST00000552768 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
LINC02396-205ENST00000552768 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
LINC02396-205ENST00000552768 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
LINC02396-205ENST00000552768 HCLS1P14317 486 aaPredicted RBP12.63□□□□□ -0.39
LINC02396-205ENST00000552768 RIC3Q7Z5B4 369 aa12.63□□□□□ -0.39
LINC02396-205ENST00000552768 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
LINC02396-205ENST00000552768 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
LINC02396-205ENST00000552768 BBOX1O75936 387 aa12.62□□□□□ -0.39
LINC02396-205ENST00000552768 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
LINC02396-205ENST00000552768 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
LINC02396-205ENST00000552768 ABCC4O15439 1325 aa12.62□□□□□ -0.39
LINC02396-205ENST00000552768 COL4A5P29400 1685 aa12.61□□□□□ -0.39
LINC02396-205ENST00000552768 TCERG1O14776 1098 aaKnown RBP12.61□□□□□ -0.39
LINC02396-205ENST00000552768 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
LINC02396-205ENST00000552768 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
LINC02396-205ENST00000552768 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
LINC02396-205ENST00000552768 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
LINC02396-205ENST00000552768 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
LINC02396-205ENST00000552768 FAM89AQ96GI7 184 aa12.61□□□□□ -0.39
LINC02396-205ENST00000552768 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
LINC02396-205ENST00000552768 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
LINC02396-205ENST00000552768 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
LINC02396-205ENST00000552768 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
LINC02396-205ENST00000552768 GPC2Q8N158 579 aa12.6□□□□□ -0.39
LINC02396-205ENST00000552768 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
LINC02396-205ENST00000552768 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
LINC02396-205ENST00000552768 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
LINC02396-205ENST00000552768 VPS33BQ9H267 617 aa12.6□□□□□ -0.39
LINC02396-205ENST00000552768 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
LINC02396-205ENST00000552768 VAMP4O75379 141 aa12.59□□□□□ -0.39
LINC02396-205ENST00000552768 DDX58O95786 925 aaKnown RBP12.59□□□□□ -0.39
LINC02396-205ENST00000552768 MYD88Q99836 296 aa12.59□□□□□ -0.39
LINC02396-205ENST00000552768 METTL22Q9BUU2 404 aaPredicted RBP12.59□□□□□ -0.39
LINC02396-205ENST00000552768 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
LINC02396-205ENST00000552768 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
LINC02396-205ENST00000552768 GRAPQ13588 217 aa12.58□□□□□ -0.4
LINC02396-205ENST00000552768 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
LINC02396-205ENST00000552768 DDX46Q7L014 1031 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms