RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 RPIAP49247 311 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 SEC13P55735 322 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 PPP1R18Q6NYC8 613 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 CCDC146Q8IYE0 955 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 CFAP53Q96M91 514 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 KCTD15Q96SI1 283 aaPredicted RBP7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 ESF1Q9H501 851 aaKnown RBP7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 MAP4K5Q9Y4K4 846 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 NSD2O96028 1365 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 ASXL2Q76L83 1435 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 ZNF518AQ6AHZ1 1483 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 ABCA6Q8N139 1617 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 IFT172Q9UG01 1749 aa7.66□□□□□ -1.18
CHMP4A-210ENST00000552620 ADGRB3O60242 1522 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 SSFA2P28290 1259 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 ARID4AP29374 1257 aaPredicted RBP7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 NOS1P29475 1434 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 CCDC102BQ68D86 513 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 SND1Q7KZF4 910 aaKnown RBP eCLIP7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 VASH1Q7L8A9 365 aaPredicted RBP7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 PMFBP1Q8TBY8 1022 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 MLH3Q9UHC1 1453 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 MAPK8IP3Q9UPT6 1336 aa7.65□□□□□ -1.18
CHMP4A-210ENST00000552620 KIDINS220Q9ULH0 1771 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 ZMYM3Q14202 1370 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 BCAR3O75815 825 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 CT47B1P0C2W7 299 aaPredicted RBP7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 ATP2B4P23634 1241 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 RAB15P59190 212 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 FAM69CQ0P6D2 419 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 C8orf34Q49A92 452 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 TPCN2Q8NHX9 752 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 MTMR7Q9Y216 660 aa7.64□□□□□ -1.19
CHMP4A-210ENST00000552620 CFAP74Q9C0B2 1584 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 EVC2Q86UK5 1308 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 ZBTB7BO15156 539 aaPredicted RBP7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 CD2BP2O95400 341 aaKnown RBP7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 TXNDC2Q86VQ3 553 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 MYH16Q9H6N6 1097 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 TRAK1Q9UPV9 953 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 PPRC1Q5VV67 1664 aaKnown RBP7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 USP32Q8NFA0 1604 aa7.63□□□□□ -1.19
CHMP4A-210ENST00000552620 NPATQ14207 1427 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 NSD3Q9BZ95 1437 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 CANXP27824 592 aaKnown RBP7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 RARSP54136 660 aaKnown RBP7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 SKOR1P84550 965 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 INTS6LQ5JSJ4 861 aaKnown RBP7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 PLA2G2CQ5R387 149 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 PHLDB3Q6NSJ2 640 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 TCP11L2Q8N4U5 519 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 SLC12A5Q9H2X9 1139 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 PCDHGA11Q9Y5H2 935 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 ADGRB1O14514 1584 aa7.62□□□□□ -1.19
CHMP4A-210ENST00000552620 ZFYVE9O95405 1425 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 CD109Q6YHK3 1445 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 POGZQ7Z3K3 1410 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 IGHDP01880 384 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 MTHFSP49914 203 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 DHX9Q08211 1270 aaKnown RBP7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 ARID5BQ14865 1188 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 RGS22Q8NE09 1264 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 C1orf216Q8TAB5 229 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 SLC52A1Q9NWF4 448 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 UGGT1Q9NYU2 1555 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 PPLO60437 1756 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 ARHGAP31Q2M1Z3 1444 aa7.61□□□□□ -1.19
CHMP4A-210ENST00000552620 ANKRD36BQ8N2N9 1353 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 SFI1A8K8P3 1242 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 DKK1O94907 266 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 RGS3P49796 1198 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 BECN1Q14457 450 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 GGT6Q6P531 493 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 PNNQ9H307 717 aaKnown RBP7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 RWDD1Q9H446 243 aaPredicted RBP7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 SLAIN2Q9P270 581 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 MROH2AA6NES4 1674 aa7.6□□□□□ -1.19
CHMP4A-210ENST00000552620 M0R2N6 131 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 RC3H1Q5TC82 1133 aaKnown RBP7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 SKAP1Q86WV1 359 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 CDK15Q96Q40 435 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 HINFPQ9BQA5 517 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 PRKD2Q9BZL6 878 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 IQSEC2Q5JU85 1478 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 NEO1Q92859 1461 aa7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 ZC3H13Q5T200 1668 aaKnown RBP7.59□□□□□ -1.19
CHMP4A-210ENST00000552620 ABCC3O15438 1527 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 IL16Q14005 1332 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 QRICH2Q9H0J4 1663 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 PRMT3O60678 531 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 FSHRP23945 695 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 TMEM132EQ6IEE7 984 aa7.58□□□□□ -1.2
CHMP4A-210ENST00000552620 MPNDQ8N594 471 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms