RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 STARD3NLO95772 234 aa11.96□□□□□ -0.49
UBE2N-206ENST00000552442 GYS1P13807 737 aa11.96□□□□□ -0.49
UBE2N-206ENST00000552442 GPR162Q16538 588 aa11.96□□□□□ -0.49
UBE2N-206ENST00000552442 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.49
UBE2N-206ENST00000552442 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.49
UBE2N-206ENST00000552442 BCORQ6W2J9 1755 aa11.96□□□□□ -0.49
UBE2N-206ENST00000552442 SEMA3EO15041 775 aa11.95□□□□□ -0.5
UBE2N-206ENST00000552442 KCNQ3O43525 872 aa11.95□□□□□ -0.5
UBE2N-206ENST00000552442 TEX13AQ9BXU3 409 aaPredicted RBP11.95□□□□□ -0.5
UBE2N-206ENST00000552442 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
UBE2N-206ENST00000552442 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
UBE2N-206ENST00000552442 ZPR1O75312 459 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 YY1P25490 414 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
UBE2N-206ENST00000552442 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBE2N-206ENST00000552442 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 ZNF454Q8N9F8 522 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 DDX12PQ92771 950 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 UTRNP46939 3433 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 NRXN2Q9P2S2 1712 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
UBE2N-206ENST00000552442 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
UBE2N-206ENST00000552442 TAF7Q15545 349 aaPredicted RBP11.93□□□□□ -0.5
UBE2N-206ENST00000552442 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
UBE2N-206ENST00000552442 PARP3Q9Y6F1 533 aa11.93□□□□□ -0.5
UBE2N-206ENST00000552442 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
UBE2N-206ENST00000552442 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
UBE2N-206ENST00000552442 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
UBE2N-206ENST00000552442 FOSBP53539 338 aa11.92□□□□□ -0.5
UBE2N-206ENST00000552442 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
UBE2N-206ENST00000552442 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
UBE2N-206ENST00000552442 EPAS1Q99814 870 aa11.92□□□□□ -0.5
UBE2N-206ENST00000552442 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
UBE2N-206ENST00000552442 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
UBE2N-206ENST00000552442 A0A087WZG4 1122 aa11.91□□□□□ -0.5
UBE2N-206ENST00000552442 TULP1O00294 542 aaPredicted RBP11.91□□□□□ -0.5
UBE2N-206ENST00000552442 SNRPA1P09661 255 aaKnown RBP11.91□□□□□ -0.5
UBE2N-206ENST00000552442 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
UBE2N-206ENST00000552442 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
UBE2N-206ENST00000552442 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
UBE2N-206ENST00000552442 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
UBE2N-206ENST00000552442 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
UBE2N-206ENST00000552442 DLEC1Q9Y238 1755 aa11.91□□□□□ -0.5
UBE2N-206ENST00000552442 A1BGP04217 495 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 YBX3P16989 372 aaKnown RBP eCLIP11.9□□□□□ -0.53e-9■■■■□ 24.7
UBE2N-206ENST00000552442 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
UBE2N-206ENST00000552442 MLLT3P42568 568 aaPredicted RBP11.9□□□□□ -0.5
UBE2N-206ENST00000552442 RIPK4P57078 832 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 DDR1Q08345 913 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 LMOD3Q0VAK6 560 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 NUP98P52948 1817 aa11.9□□□□□ -0.5
UBE2N-206ENST00000552442 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
UBE2N-206ENST00000552442 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
UBE2N-206ENST00000552442 TMPOP42166 694 aaKnown RBP11.89□□□□□ -0.51
UBE2N-206ENST00000552442 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
UBE2N-206ENST00000552442 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
UBE2N-206ENST00000552442 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
UBE2N-206ENST00000552442 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
UBE2N-206ENST00000552442 CACNA1SQ13698 1873 aa11.89□□□□□ -0.51
UBE2N-206ENST00000552442 POLRMTO00411 1230 aaKnown RBP11.88□□□□□ -0.51
UBE2N-206ENST00000552442 TM4SF1P30408 202 aa11.88□□□□□ -0.51
UBE2N-206ENST00000552442 NFIXQ14938 502 aa11.88□□□□□ -0.51
UBE2N-206ENST00000552442 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
UBE2N-206ENST00000552442 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
UBE2N-206ENST00000552442 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
UBE2N-206ENST00000552442 ADAMTS8Q9UP79 889 aa11.88□□□□□ -0.51
UBE2N-206ENST00000552442 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
UBE2N-206ENST00000552442 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
UBE2N-206ENST00000552442 TGFB2P61812 414 aa11.87□□□□□ -0.51
UBE2N-206ENST00000552442 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
UBE2N-206ENST00000552442 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
UBE2N-206ENST00000552442 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
UBE2N-206ENST00000552442 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
UBE2N-206ENST00000552442 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
UBE2N-206ENST00000552442 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
UBE2N-206ENST00000552442 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
UBE2N-206ENST00000552442 POTEMA6NI47 508 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 NBPF26B4DH59 902 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
UBE2N-206ENST00000552442 CAMTA2O94983 1202 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 DPEP1P16444 411 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 NBPF10Q6P3W6 841 aaKnown RBP11.85□□□□□ -0.51
UBE2N-206ENST00000552442 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
UBE2N-206ENST00000552442 NBPF15Q8N660 670 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 CCDC88AQ3V6T2 1871 aa11.85□□□□□ -0.51
UBE2N-206ENST00000552442 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
UBE2N-206ENST00000552442 SERPINB2P05120 415 aa11.84□□□□□ -0.51
UBE2N-206ENST00000552442 TBC1D9BQ66K14 1250 aa11.84□□□□□ -0.51
UBE2N-206ENST00000552442 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
UBE2N-206ENST00000552442 SBF1O95248 1867 aa11.84□□□□□ -0.51
UBE2N-206ENST00000552442 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
UBE2N-206ENST00000552442 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
UBE2N-206ENST00000552442 ANP32CO43423 234 aa11.83□□□□□ -0.52
UBE2N-206ENST00000552442 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms