RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 PRDM6Q9NQX0 595 aa6.15□□□□□ -1.43
USP44-208ENST00000552440 KLF15Q9UIH9 416 aa6.15□□□□□ -1.43
USP44-208ENST00000552440 PIK3CDO00329 1044 aa6.14□□□□□ -1.43
USP44-208ENST00000552440 HIRAP54198 1017 aaPredicted RBP6.14□□□□□ -1.43
USP44-208ENST00000552440 CDCA8Q53HL2 280 aa6.14□□□□□ -1.43
USP44-208ENST00000552440 SYT9Q86SS6 491 aa6.14□□□□□ -1.43
USP44-208ENST00000552440 GAS2L2Q8NHY3 880 aa6.14□□□□□ -1.43
USP44-208ENST00000552440 RHPN1Q8TCX5 695 aa6.14□□□□□ -1.43
USP44-208ENST00000552440 PLVAPQ9BX97 442 aa6.14□□□□□ -1.43
USP44-208ENST00000552440 FURINP09958 794 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 GATA4P43694 442 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 LRRC69Q6ZNQ3 347 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 TNFRSF25Q93038 417 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 TXLNAP40222 546 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 EPHA4P54764 986 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 CCDC102BQ68D86 513 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 PARP3Q9Y6F1 533 aa6.13□□□□□ -1.43
USP44-208ENST00000552440 ZDHHC1Q8WTX9 485 aa6.12□□□□□ -1.43
USP44-208ENST00000552440 ATP9BO43861 1147 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 KCNQ4P56696 695 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 TRIM28Q13263 835 aaKnown RBP6.11□□□□□ -1.43
USP44-208ENST00000552440 TNS4Q8IZW8 715 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 STAG2Q8N3U4 1231 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 TPCN2Q8NHX9 752 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 GNEQ9Y223 722 aaKnown RBP6.11□□□□□ -1.43
USP44-208ENST00000552440 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 RBM47A0AV96 593 aaKnown RBP6.11□□□□□ -1.43
USP44-208ENST00000552440 SPEM2Q0P670 501 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 KANK4Q5T7N3 995 aaPredicted RBP6.11□□□□□ -1.43
USP44-208ENST00000552440 CEP63Q96MT8 703 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 KCNH4Q9UQ05 1017 aa6.11□□□□□ -1.43
USP44-208ENST00000552440 USP17L3A6NCW0 530 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 USP17L4A6NCW7 530 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 CHRNA4P43681 627 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 XP32Q5T750 250 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 USP17L2Q6R6M4 530 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 POTEAQ6S8J7 498 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 USP17L1Q7RTZ2 530 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 TRIM11Q96F44 468 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 STRN4Q9NRL3 753 aa6.1□□□□□ -1.43
USP44-208ENST00000552440 ELOAQ14241 798 aaKnown RBP6.09□□□□□ -1.43
USP44-208ENST00000552440 PCSK7Q16549 785 aa6.09□□□□□ -1.43
USP44-208ENST00000552440 SIX5Q8N196 739 aa6.09□□□□□ -1.43
USP44-208ENST00000552440 DEPDC4Q8N2C3 294 aa6.09□□□□□ -1.43
USP44-208ENST00000552440 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
USP44-208ENST00000552440 MDFIQ99750 246 aa6.09□□□□□ -1.43
USP44-208ENST00000552440 BRD7Q9NPI1 651 aa6.09□□□□□ -1.43
USP44-208ENST00000552440 ZBTB7BO15156 539 aaPredicted RBP6.09□□□□□ -1.44
USP44-208ENST00000552440 SMARCA5O60264 1052 aaPredicted RBP6.09□□□□□ -1.44
USP44-208ENST00000552440 OGFOD1Q8N543 542 aa6.09□□□□□ -1.44
USP44-208ENST00000552440 SPATA32Q96LK8 384 aa6.09□□□□□ -1.44
USP44-208ENST00000552440 MKRN1Q9UHC7 482 aaKnown RBP6.09□□□□□ -1.44
USP44-208ENST00000552440 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.44
USP44-208ENST00000552440 ARID4BQ4LE39 1312 aaPredicted RBP6.08□□□□□ -1.44
USP44-208ENST00000552440 M0R082 166 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 PPP1R12BO60237 982 aaPredicted RBP6.08□□□□□ -1.44
USP44-208ENST00000552440 ADH7P40394 386 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 SFSWAPQ12872 951 aaKnown RBP6.08□□□□□ -1.44
USP44-208ENST00000552440 B4GALNT3Q6L9W6 998 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 CERS3Q8IU89 383 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 ZNF417Q8TAU3 575 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 ZNF587Q96SQ5 575 aaPredicted RBP6.08□□□□□ -1.44
USP44-208ENST00000552440 PHACTR1Q9C0D0 580 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 SEMA6BQ9H3T3 888 aa6.08□□□□□ -1.44
USP44-208ENST00000552440 SFI1A8K8P3 1242 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 C9orf172C9J069 976 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 LILRB5O75023 590 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 TAF7LQ5H9L4 462 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 TMEM164Q5U3C3 297 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 Q8N3U1 123 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 HCN2Q9UL51 889 aa6.07□□□□□ -1.44
USP44-208ENST00000552440 EPB42P16452 691 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 NRG1Q02297 640 aaPredicted RBP6.06□□□□□ -1.44
USP44-208ENST00000552440 DOC2BQ14184 412 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 STK32AQ8WU08 396 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 SUSD3Q96L08 255 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 TSPAN10Q9H1Z9 355 aaPredicted RBP6.06□□□□□ -1.44
USP44-208ENST00000552440 C11orf16Q9NQ32 467 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 KIAA1522Q9P206 1035 aaPredicted RBP6.06□□□□□ -1.44
USP44-208ENST00000552440 HCN4Q9Y3Q4 1203 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 SEC13P55735 322 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 RAC1P63000 192 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 CLDN10P78369 228 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 TBCELQ5QJ74 424 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 IER5Q5VY09 327 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 PHLDB3Q6NSJ2 640 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 LARP1Q6PKG0 1096 aaKnown RBP6.06□□□□□ -1.44
USP44-208ENST00000552440 TXNDC2Q86VQ3 553 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 MRRFQ96E11 262 aaKnown RBP6.06□□□□□ -1.44
USP44-208ENST00000552440 DRC1Q96MC2 740 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 SLC30A3Q99726 388 aa6.06□□□□□ -1.44
USP44-208ENST00000552440 ATAD2Q6PL18 1390 aa6.05□□□□□ -1.44
USP44-208ENST00000552440 CADPSQ9ULU8 1353 aa6.05□□□□□ -1.44
USP44-208ENST00000552440 NCLP19338 710 aaKnown RBP6.05□□□□□ -1.44
USP44-208ENST00000552440 ANKRD13AQ8IZ07 590 aa6.05□□□□□ -1.44
USP44-208ENST00000552440 RASA1P20936 1047 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 ARID4AP29374 1257 aaPredicted RBP6.04□□□□□ -1.44
USP44-208ENST00000552440 TYRO3Q06418 890 aa6.04□□□□□ -1.44
USP44-208ENST00000552440 TRAPPC3LQ5T215 181 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms