RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 KDM2BQ8NHM5 1336 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 TCERG1O14776 1098 aaKnown RBP14.09□□□□□ -0.15
TMEM116-215ENST00000552374 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
TMEM116-215ENST00000552374 CRY2Q49AN0 593 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 CCDC93Q567U6 631 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 SLC10A5Q5PT55 438 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 CCDC30Q5VVM6 783 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
TMEM116-215ENST00000552374 CHMP4AQ9BY43 222 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
TMEM116-215ENST00000552374 GOLGA2Q08379 1002 aa14.08□□□□□ -0.15
TMEM116-215ENST00000552374 LAMB4A4D0S4 1761 aa14.08□□□□□ -0.16
TMEM116-215ENST00000552374 BCORQ6W2J9 1755 aa14.08□□□□□ -0.16
TMEM116-215ENST00000552374 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
TMEM116-215ENST00000552374 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
TMEM116-215ENST00000552374 C16orf71Q8IYS4 520 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
TMEM116-215ENST00000552374 IBTKQ9P2D0 1353 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 ANKRD31Q8N7Z5 1873 aa14.07□□□□□ -0.16
TMEM116-215ENST00000552374 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 TWISTNBQ3B726 338 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
TMEM116-215ENST00000552374 CRAMP1Q96RY5 1269 aa14.07□□□□□ -0.16
TMEM116-215ENST00000552374 ZNF277Q9NRM2 450 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-215ENST00000552374 IL16Q14005 1332 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 GLTPD2A6NH11 291 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 TOMM70O94826 608 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
TMEM116-215ENST00000552374 FAM89AQ96GI7 184 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 ISCA1Q9BUE6 129 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 STK31Q9BXU1 1019 aa14.06□□□□□ -0.16
TMEM116-215ENST00000552374 ARFGEF1Q9Y6D6 1849 aa14.05□□□□□ -0.16
TMEM116-215ENST00000552374 LTBP3Q9NS15 1303 aa14.05□□□□□ -0.16
TMEM116-215ENST00000552374 ZC3H4Q9UPT8 1303 aaKnown RBP14.05□□□□□ -0.16
TMEM116-215ENST00000552374 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
TMEM116-215ENST00000552374 MYD88Q99836 296 aa14.05□□□□□ -0.16
TMEM116-215ENST00000552374 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
TMEM116-215ENST00000552374 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
TMEM116-215ENST00000552374 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
TMEM116-215ENST00000552374 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
TMEM116-215ENST00000552374 DDX46Q7L014 1031 aaKnown RBP14.04□□□□□ -0.16
TMEM116-215ENST00000552374 SLX4Q8IY92 1834 aa14.03□□□□□ -0.16
TMEM116-215ENST00000552374 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
TMEM116-215ENST00000552374 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
TMEM116-215ENST00000552374 TRIM28Q13263 835 aaKnown RBP14.03□□□□□ -0.16
TMEM116-215ENST00000552374 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
TMEM116-215ENST00000552374 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
TMEM116-215ENST00000552374 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
TMEM116-215ENST00000552374 NUP98P52948 1817 aa14.03□□□□□ -0.16
TMEM116-215ENST00000552374 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
TMEM116-215ENST00000552374 IRS4O14654 1257 aaPredicted RBP14.02□□□□□ -0.16
TMEM116-215ENST00000552374 BBOX1O75936 387 aa14.02□□□□□ -0.16
TMEM116-215ENST00000552374 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.16
TMEM116-215ENST00000552374 SLC51AQ86UW1 340 aa14.02□□□□□ -0.16
TMEM116-215ENST00000552374 JARID2Q92833 1246 aaPredicted RBP14.02□□□□□ -0.16
TMEM116-215ENST00000552374 METTL22Q9BUU2 404 aaPredicted RBP14.02□□□□□ -0.16
TMEM116-215ENST00000552374 COL11A2P13942 1736 aaPredicted RBP14.02□□□□□ -0.17
TMEM116-215ENST00000552374 PI4KAP2A4QPH2 592 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 VAMP4O75379 141 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
TMEM116-215ENST00000552374 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 G2E3Q7L622 706 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 PI4KAP1Q8N8J0 262 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
TMEM116-215ENST00000552374 PSMD1Q99460 953 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 ABCC4O15439 1325 aa14.01□□□□□ -0.17
TMEM116-215ENST00000552374 DLEC1Q9Y238 1755 aa14□□□□□ -0.17
TMEM116-215ENST00000552374 HSPA6P17066 643 aa14□□□□□ -0.17
TMEM116-215ENST00000552374 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
TMEM116-215ENST00000552374 CCDC191Q8NCU4 936 aa14□□□□□ -0.17
TMEM116-215ENST00000552374 JDP2Q8WYK2 163 aa14□□□□□ -0.17
TMEM116-215ENST00000552374 MYH16Q9H6N6 1097 aa14□□□□□ -0.17
TMEM116-215ENST00000552374 GRAPQ13588 217 aa13.99□□□□□ -0.17
TMEM116-215ENST00000552374 RIC1Q4ADV7 1423 aa13.99□□□□□ -0.17
TMEM116-215ENST00000552374 SP8Q8IXZ3 490 aa13.99□□□□□ -0.17
TMEM116-215ENST00000552374 RBM46Q8TBY0 533 aaKnown RBP13.99□□□□□ -0.17
TMEM116-215ENST00000552374 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
TMEM116-215ENST00000552374 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
TMEM116-215ENST00000552374 POTECB2RU33 542 aa13.98□□□□□ -0.17
TMEM116-215ENST00000552374 NEXNQ0ZGT2 675 aa13.98□□□□□ -0.17
TMEM116-215ENST00000552374 SF3B3Q15393 1217 aaKnown RBP13.98□□□□□ -0.17
TMEM116-215ENST00000552374 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
TMEM116-215ENST00000552374 HSP90B1P14625 803 aaKnown RBP13.98□□□□□ -0.17
TMEM116-215ENST00000552374 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
TMEM116-215ENST00000552374 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
TMEM116-215ENST00000552374 MPNDQ8N594 471 aa13.98□□□□□ -0.17
TMEM116-215ENST00000552374 CEP350Q5VT06 3117 aa13.97□□□□□ -0.17
TMEM116-215ENST00000552374 SBF1O95248 1867 aa13.97□□□□□ -0.17
TMEM116-215ENST00000552374 TNRC6CQ9HCJ0 1690 aaKnown RBP13.97□□□□□ -0.17
TMEM116-215ENST00000552374 FZD9O00144 591 aa13.97□□□□□ -0.17
TMEM116-215ENST00000552374 PPIP5K2O43314 1243 aa13.97□□□□□ -0.17
TMEM116-215ENST00000552374 PCCAP05165 728 aaPredicted RBP13.97□□□□□ -0.17
TMEM116-215ENST00000552374 IGKV5-2P06315 115 aa13.97□□□□□ -0.17
TMEM116-215ENST00000552374 FSTL1Q12841 308 aa13.97□□□□□ -0.17
TMEM116-215ENST00000552374 FLIIQ13045 1269 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms