RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, humanhuman

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-223ENST00000552352 UNC5CLQ8IV45 518 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
RPH3A-223ENST00000552352 PKD1L3Q7Z443 1732 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 STRCQ7RTU9 1775 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 EIF4A1P60842 406 aaKnown RBP9.56□□□□□ -0.88
RPH3A-223ENST00000552352 G2E3Q7L622 706 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 IL25Q9H293 177 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 LIMCH1Q9UPQ0 1083 aa9.56□□□□□ -0.88
RPH3A-223ENST00000552352 PARP4Q9UKK3 1724 aaKnown RBP9.56□□□□□ -0.88
RPH3A-223ENST00000552352 PNMA6EA0A0J9YXQ4 647 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 CCDC192P0DO97 292 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.88
RPH3A-223ENST00000552352 ZNF530Q6P9A1 599 aaPredicted RBP9.55□□□□□ -0.88
RPH3A-223ENST00000552352 SMC3Q9UQE7 1217 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 SNX14Q9Y5W7 946 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 RNMTO43148 476 aaKnown RBP9.55□□□□□ -0.88
RPH3A-223ENST00000552352 AK2P54819 239 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 RUFY3Q7L099 469 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 USHBP1Q8N6Y0 703 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 MIS18AQ9NYP9 233 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 SPATA31A3Q5VYP0 1347 aa9.55□□□□□ -0.88
RPH3A-223ENST00000552352 OGFRQ9NZT2 677 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 RGPD5Q99666 1765 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 SCN11AQ9UI33 1791 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 SGSM2O43147 1006 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 C1orf141Q5JVX7 400 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 SPC24Q8NBT2 197 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 FAM200AQ8TCP9 573 aa9.54□□□□□ -0.88
RPH3A-223ENST00000552352 NCBP1Q09161 790 aaKnown RBP9.53□□□□□ -0.88
RPH3A-223ENST00000552352 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
RPH3A-223ENST00000552352 LRRC59Q96AG4 307 aaKnown RBP9.53□□□□□ -0.88
RPH3A-223ENST00000552352 LSG1Q9H089 658 aaKnown RBP9.53□□□□□ -0.88
RPH3A-223ENST00000552352 SMTNL1A8MU46 457 aa9.53□□□□□ -0.88
RPH3A-223ENST00000552352 DNM1Q05193 864 aaKnown RBP9.53□□□□□ -0.88
RPH3A-223ENST00000552352 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
RPH3A-223ENST00000552352 TEFQ10587 303 aa9.53□□□□□ -0.88
RPH3A-223ENST00000552352 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
RPH3A-223ENST00000552352 MTMR6Q9Y217 621 aa9.53□□□□□ -0.88
RPH3A-223ENST00000552352 PTGS1P23219 599 aa9.52□□□□□ -0.88
RPH3A-223ENST00000552352 GJB2P29033 226 aa9.52□□□□□ -0.88
RPH3A-223ENST00000552352 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.88
RPH3A-223ENST00000552352 RAB11FIP3O75154 756 aa9.52□□□□□ -0.89
RPH3A-223ENST00000552352 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
RPH3A-223ENST00000552352 PI4K2BQ8TCG2 481 aa9.52□□□□□ -0.89
RPH3A-223ENST00000552352 LGR6Q9HBX8 967 aa9.52□□□□□ -0.89
RPH3A-223ENST00000552352 HYPKQ9NX55 129 aa9.52□□□□□ -0.89
RPH3A-223ENST00000552352 A0A0U1RQG5 324 aaPredicted RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 GABPB1Q06547 395 aaPredicted RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 POLA2Q14181 598 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 MAP3K11Q16584 847 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 CGNQ9P2M7 1197 aaKnown RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 LRRFIP2Q9Y608 721 aaKnown RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 MRVI1Q9Y6F6 885 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 ABCA3Q99758 1704 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 SOS2Q07890 1332 aaPredicted RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 BTBD11A6QL63 1104 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 LARGE1O95461 756 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 CASTP20810 708 aaKnown RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 TYRO3Q06418 890 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 VPS53Q5VIR6 699 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
RPH3A-223ENST00000552352 NUTM1Q86Y26 1132 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 CNTROBQ8N137 903 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 IL1RAPL2Q9NP60 686 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 CTNNA3Q9UI47 895 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 PAXBP1Q9Y5B6 917 aa9.51□□□□□ -0.89
RPH3A-223ENST00000552352 NHSL1Q5SYE7 1610 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 ELP1O95163 1332 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 CCDC171Q6TFL3 1326 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 CCDC83Q8IWF9 413 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 SSH3Q8TE77 659 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
RPH3A-223ENST00000552352 NUP62CLQ9H1M0 184 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 KDM6AO15550 1401 aaPredicted RBP9.5□□□□□ -0.89
RPH3A-223ENST00000552352 MEGF6O75095 1541 aa9.5□□□□□ -0.89
RPH3A-223ENST00000552352 C16orf45Q96MC5 204 aaPredicted RBP9.5□□□□□ -0.89
RPH3A-223ENST00000552352 DBF4Q9UBU7 674 aaPredicted RBP9.5□□□□□ -0.89
RPH3A-223ENST00000552352 MAP4K4O95819 1239 aaPredicted RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 UBTFL1P0CB47 393 aaPredicted RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 TATP17735 454 aaPredicted RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 KRT85P78386 507 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 ZSCAN25Q6NSZ9 544 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 CCDC186Q7Z3E2 898 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 PLA2G4DQ86XP0 818 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 RAPGEF4Q8WZA2 1011 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 TM6SF1Q9BZW5 370 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 DDX41Q9UJV9 622 aaKnown RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
RPH3A-223ENST00000552352 ALDH1L1O75891 902 aa9.49□□□□□ -0.89
RPH3A-223ENST00000552352 TNNT1P13805 278 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms