RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
NEK3-203ENST00000551355 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
NEK3-203ENST00000551355 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
NEK3-203ENST00000551355 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
NEK3-203ENST00000551355 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
NEK3-203ENST00000551355 NIP7Q9Y221 180 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEK3-203ENST00000551355 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
NEK3-203ENST00000551355 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
NEK3-203ENST00000551355 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 MTX1Q13505 466 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
NEK3-203ENST00000551355 ARFGEF2Q9Y6D5 1785 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
NEK3-203ENST00000551355 GPTP24298 496 aa12.97□□□□□ -0.33
NEK3-203ENST00000551355 CASP7P55210 303 aa12.97□□□□□ -0.33
NEK3-203ENST00000551355 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
NEK3-203ENST00000551355 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
NEK3-203ENST00000551355 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
NEK3-203ENST00000551355 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 RABL6Q3YEC7 729 aaPredicted RBP12.96□□□□□ -0.33
NEK3-203ENST00000551355 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
NEK3-203ENST00000551355 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
NEK3-203ENST00000551355 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 GYS1P13807 737 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 SIRT2Q8IXJ6 389 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 SSH3Q8TE77 659 aa12.95□□□□□ -0.34
NEK3-203ENST00000551355 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 IRS4O14654 1257 aaPredicted RBP12.94□□□□□ -0.34
NEK3-203ENST00000551355 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 PDE8AO60658 829 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 IGHDP01880 384 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 POLA2Q14181 598 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
NEK3-203ENST00000551355 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEK3-203ENST00000551355 FAM89AQ96GI7 184 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
NEK3-203ENST00000551355 DCTPP1Q9H773 170 aa12.94□□□□□ -0.34
NEK3-203ENST00000551355 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
NEK3-203ENST00000551355 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
NEK3-203ENST00000551355 NTSR2O95665 410 aa12.93□□□□□ -0.34
NEK3-203ENST00000551355 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
NEK3-203ENST00000551355 SLC10A5Q5PT55 438 aa12.93□□□□□ -0.34
NEK3-203ENST00000551355 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
NEK3-203ENST00000551355 KAZALD1Q96I82 304 aa12.93□□□□□ -0.34
NEK3-203ENST00000551355 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
NEK3-203ENST00000551355 BCORQ6W2J9 1755 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 CSF1RP07333 972 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 TM4SF1P30408 202 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 FOXO4P98177 505 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 NFIXQ14938 502 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
NEK3-203ENST00000551355 PNMA6EA0A0J9YXQ4 647 aa12.91□□□□□ -0.34
NEK3-203ENST00000551355 NPHP1O15259 732 aa12.91□□□□□ -0.34
NEK3-203ENST00000551355 CTSWP56202 376 aa12.91□□□□□ -0.34
NEK3-203ENST00000551355 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
NEK3-203ENST00000551355 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
NEK3-203ENST00000551355 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
NEK3-203ENST00000551355 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
NEK3-203ENST00000551355 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
NEK3-203ENST00000551355 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
NEK3-203ENST00000551355 NOP58Q9Y2X3 529 aaKnown RBP12.91□□□□□ -0.34
NEK3-203ENST00000551355 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 JARID2Q92833 1246 aaPredicted RBP12.9□□□□□ -0.34
NEK3-203ENST00000551355 COPRSQ9NQ92 184 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 NUP98P52948 1817 aa12.9□□□□□ -0.34
NEK3-203ENST00000551355 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
NEK3-203ENST00000551355 ST5P78524 1137 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 NUCB1Q02818 461 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
NEK3-203ENST00000551355 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 RTL9Q8NET4 1388 aa12.89□□□□□ -0.35
NEK3-203ENST00000551355 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
NEK3-203ENST00000551355 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
NEK3-203ENST00000551355 SERPINB2P05120 415 aa12.88□□□□□ -0.35
NEK3-203ENST00000551355 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms