RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 ZNF526Q8TF50 670 aaPredicted RBP24.5■■□□□ 1.51
DDX54-208ENST00000551344 C7orf43Q8WVR3 580 aa24.5■■□□□ 1.51
DDX54-208ENST00000551344 ABCC12Q96J65 1359 aa24.5■■□□□ 1.51
DDX54-208ENST00000551344 NFKBIEO00221 500 aa24.49■■□□□ 1.51
DDX54-208ENST00000551344 NLRP3Q96P20 1036 aa24.49■■□□□ 1.51
DDX54-208ENST00000551344 HOXA10P31260 410 aaPredicted RBP24.48■■□□□ 1.51
DDX54-208ENST00000551344 TWISTNBQ3B726 338 aaPredicted RBP24.48■■□□□ 1.51
DDX54-208ENST00000551344 ISCA1Q9BUE6 129 aa24.48■■□□□ 1.51
DDX54-208ENST00000551344 PHAXQ9H814 394 aaKnown RBP24.48■■□□□ 1.51
DDX54-208ENST00000551344 LTBP3Q9NS15 1303 aa24.47■■□□□ 1.51
DDX54-208ENST00000551344 ZC3H4Q9UPT8 1303 aaKnown RBP24.47■■□□□ 1.51
DDX54-208ENST00000551344 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
DDX54-208ENST00000551344 TRIM28Q13263 835 aaKnown RBP24.47■■□□□ 1.51
DDX54-208ENST00000551344 RIC3Q7Z5B4 369 aa24.47■■□□□ 1.51
DDX54-208ENST00000551344 RPGRQ92834 1020 aaKnown RBP24.47■■□□□ 1.51
DDX54-208ENST00000551344 TRMT112Q9UI30 125 aaKnown RBP24.47■■□□□ 1.51
DDX54-208ENST00000551344 SLX4Q8IY92 1834 aa24.47■■□□□ 1.51
DDX54-208ENST00000551344 PRELPP51888 382 aa24.46■■□□□ 1.51
DDX54-208ENST00000551344 C1QTNF8P60827 252 aa24.46■■□□□ 1.51
DDX54-208ENST00000551344 SBF1O95248 1867 aa24.45■■□□□ 1.51
DDX54-208ENST00000551344 FANCIQ9NVI1 1328 aa24.45■■□□□ 1.5
DDX54-208ENST00000551344 CCDC93Q567U6 631 aa24.45■■□□□ 1.5
DDX54-208ENST00000551344 RBM17Q96I25 401 aaKnown RBP24.45■■□□□ 1.5
DDX54-208ENST00000551344 CRAMP1Q96RY5 1269 aa24.45■■□□□ 1.5
DDX54-208ENST00000551344 STK31Q9BXU1 1019 aa24.45■■□□□ 1.5
DDX54-208ENST00000551344 TAOK3Q9H2K8 898 aa24.45■■□□□ 1.5
DDX54-208ENST00000551344 SH3TC1Q8TE82 1336 aa24.44■■□□□ 1.5
DDX54-208ENST00000551344 DDX58O95786 925 aaKnown RBP24.44■■□□□ 1.5
DDX54-208ENST00000551344 ATP5J2-PTCD1G3V325 749 aa24.43■■□□□ 1.5
DDX54-208ENST00000551344 CCER2I3L3R5 266 aa24.43■■□□□ 1.5
DDX54-208ENST00000551344 RTKN2Q8IZC4 609 aa24.43■■□□□ 1.5
DDX54-208ENST00000551344 CC2D2BQ6DHV5 1058 aa24.42■■□□□ 1.5
DDX54-208ENST00000551344 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
DDX54-208ENST00000551344 ARFGEF2Q9Y6D5 1785 aa24.42■■□□□ 1.5
DDX54-208ENST00000551344 KDM2BQ8NHM5 1336 aa24.41■■□□□ 1.5
DDX54-208ENST00000551344 HCLS1P14317 486 aaPredicted RBP24.41■■□□□ 1.5
DDX54-208ENST00000551344 C3orf67Q6ZVT6 689 aa24.41■■□□□ 1.5
DDX54-208ENST00000551344 SYNE4Q8N205 404 aa24.41■■□□□ 1.5
DDX54-208ENST00000551344 ANKRD36CQ5JPF3 1778 aa24.41■■□□□ 1.5
DDX54-208ENST00000551344 TNRC6CQ9HCJ0 1690 aaKnown RBP24.4■■□□□ 1.5
DDX54-208ENST00000551344 VAMP4O75379 141 aa24.4■■□□□ 1.5
DDX54-208ENST00000551344 SLC4A2P04920 1241 aa24.4■■□□□ 1.5
DDX54-208ENST00000551344 GRIPAP1Q4V328 841 aa24.4■■□□□ 1.5
DDX54-208ENST00000551344 SPINK5Q9NQ38 1064 aaPredicted RBP24.4■■□□□ 1.5
DDX54-208ENST00000551344 FER1L6Q2WGJ9 1857 aa24.4■■□□□ 1.5
DDX54-208ENST00000551344 KIF3CO14782 793 aa24.39■■□□□ 1.49
DDX54-208ENST00000551344 EXOSC9Q06265 439 aaKnown RBP24.39■■□□□ 1.49
DDX54-208ENST00000551344 KSR2Q6VAB6 950 aa24.39■■□□□ 1.49
DDX54-208ENST00000551344 METTL22Q9BUU2 404 aaPredicted RBP24.39■■□□□ 1.49
DDX54-208ENST00000551344 FKBP4Q02790 459 aaKnown RBP eCLIP24.38■■□□□ 1.49
DDX54-208ENST00000551344 CCDC191Q8NCU4 936 aa24.38■■□□□ 1.49
DDX54-208ENST00000551344 FAM89AQ96GI7 184 aa24.38■■□□□ 1.49
DDX54-208ENST00000551344 ZNF521Q96K83 1311 aa24.37■■□□□ 1.49
DDX54-208ENST00000551344 GLTPD2A6NH11 291 aa24.37■■□□□ 1.49
DDX54-208ENST00000551344 TCERG1O14776 1098 aaKnown RBP24.37■■□□□ 1.49
DDX54-208ENST00000551344 DPY19L2Q6NUT2 758 aa24.37■■□□□ 1.49
DDX54-208ENST00000551344 OLFM4Q6UX06 510 aa24.37■■□□□ 1.49
DDX54-208ENST00000551344 MYD88Q99836 296 aa24.37■■□□□ 1.49
DDX54-208ENST00000551344 CACNA1SQ13698 1873 aa24.36■■□□□ 1.49
DDX54-208ENST00000551344 PI4KAP2A4QPH2 592 aa24.36■■□□□ 1.49
DDX54-208ENST00000551344 BBOX1O75936 387 aa24.36■■□□□ 1.49
DDX54-208ENST00000551344 PI4KAP1Q8N8J0 262 aa24.36■■□□□ 1.49
DDX54-208ENST00000551344 ZBTB38Q8NAP3 1195 aaPredicted RBP24.36■■□□□ 1.49
DDX54-208ENST00000551344 NMRK2Q9NPI5 230 aa24.36■■□□□ 1.49
DDX54-208ENST00000551344 MAP3K2Q9Y2U5 619 aa24.36■■□□□ 1.49
DDX54-208ENST00000551344 PPEF1O14829 653 aaPredicted RBP24.35■■□□□ 1.49
DDX54-208ENST00000551344 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
DDX54-208ENST00000551344 DDX46Q7L014 1031 aaKnown RBP24.35■■□□□ 1.49
DDX54-208ENST00000551344 ZNF428Q96B54 188 aa24.35■■□□□ 1.49
DDX54-208ENST00000551344 PSMD1Q99460 953 aa24.35■■□□□ 1.49
DDX54-208ENST00000551344 TMX4Q9H1E5 349 aaPredicted RBP24.35■■□□□ 1.49
DDX54-208ENST00000551344 CCDC88AQ3V6T2 1871 aa24.34■■□□□ 1.49
DDX54-208ENST00000551344 SF3B3Q15393 1217 aaKnown RBP24.34■■□□□ 1.49
DDX54-208ENST00000551344 G2E3Q7L622 706 aa24.34■■□□□ 1.49
DDX54-208ENST00000551344 CWC25Q9NXE8 425 aaPredicted RBP24.34■■□□□ 1.49
DDX54-208ENST00000551344 IRS4O14654 1257 aaPredicted RBP24.33■■□□□ 1.49
DDX54-208ENST00000551344 RRAGCQ9HB90 399 aa24.33■■□□□ 1.49
DDX54-208ENST00000551344 ATP6V0A2Q9Y487 856 aa24.33■■□□□ 1.49
DDX54-208ENST00000551344 ABCC4O15439 1325 aa24.33■■□□□ 1.48
DDX54-208ENST00000551344 TOMM70O94826 608 aa24.32■■□□□ 1.48
DDX54-208ENST00000551344 PCCAP05165 728 aaPredicted RBP24.32■■□□□ 1.48
DDX54-208ENST00000551344 NEXNQ0ZGT2 675 aa24.32■■□□□ 1.48
DDX54-208ENST00000551344 FLIIQ13045 1269 aa24.32■■□□□ 1.48
DDX54-208ENST00000551344 ZNF277Q9NRM2 450 aaPredicted RBP24.32■■□□□ 1.48
DDX54-208ENST00000551344 GRAPQ13588 217 aa24.31■■□□□ 1.48
DDX54-208ENST00000551344 RTL5Q5HYW3 569 aaPredicted RBP24.31■■□□□ 1.48
DDX54-208ENST00000551344 SP8Q8IXZ3 490 aa24.31■■□□□ 1.48
DDX54-208ENST00000551344 GRAPLQ8TC17 118 aaPredicted RBP24.31■■□□□ 1.48
DDX54-208ENST00000551344 SNED1Q8TER0 1413 aa24.3■■□□□ 1.48
DDX54-208ENST00000551344 IARSP41252 1262 aaKnown RBP24.3■■□□□ 1.48
DDX54-208ENST00000551344 TMC4Q7Z404 712 aa24.3■■□□□ 1.48
DDX54-208ENST00000551344 DICER1Q9UPY3 1922 aaKnown RBP24.29■■□□□ 1.48
DDX54-208ENST00000551344 IGKV5-2P06315 115 aa24.29■■□□□ 1.48
DDX54-208ENST00000551344 VEGFAP15692 232 aaPredicted RBP24.29■■□□□ 1.48
DDX54-208ENST00000551344 C16orf71Q8IYS4 520 aaPredicted RBP24.29■■□□□ 1.48
DDX54-208ENST00000551344 E9PSI1 815 aa24.28■■□□□ 1.48
DDX54-208ENST00000551344 FKBP5Q13451 457 aaPredicted RBP24.28■■□□□ 1.48
DDX54-208ENST00000551344 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
DDX54-208ENST00000551344 VPS33BQ9H267 617 aa24.27■■□□□ 1.48
DDX54-208ENST00000551344 CACNA1FO60840 1977 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms