RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SPATA31A7Q8IWB4 1347 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 NUTM2BA6NNL0 878 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-208ENST00000551338 NUTM2EB1AL46 878 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-208ENST00000551338 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-208ENST00000551338 IFIT2P09913 472 aaKnown RBP14.05□□□□□ -0.16
RAB5C-208ENST00000551338 PIP4K2BP78356 416 aa14.05□□□□□ -0.16
RAB5C-208ENST00000551338 PTPN12Q05209 780 aaKnown RBP14.05□□□□□ -0.16
RAB5C-208ENST00000551338 NUTM2AQ8IVF1 878 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-208ENST00000551338 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
RAB5C-208ENST00000551338 FRAT2O75474 233 aaPredicted RBP14.04□□□□□ -0.16
RAB5C-208ENST00000551338 GPATCH3Q96I76 525 aa14.04□□□□□ -0.16
RAB5C-208ENST00000551338 TLR7Q9NYK1 1049 aaKnown RBP14.04□□□□□ -0.16
RAB5C-208ENST00000551338 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
RAB5C-208ENST00000551338 THSD7AQ9UPZ6 1657 aa14.04□□□□□ -0.16
RAB5C-208ENST00000551338 DDX60Q8IY21 1712 aaKnown RBP14.04□□□□□ -0.16
RAB5C-208ENST00000551338 MYH7P12883 1935 aa14.03□□□□□ -0.16
RAB5C-208ENST00000551338 EPB41L2O43491 1005 aaKnown RBP14.03□□□□□ -0.16
RAB5C-208ENST00000551338 CYP19A1P11511 503 aaPredicted RBP14.03□□□□□ -0.16
RAB5C-208ENST00000551338 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
RAB5C-208ENST00000551338 DDB1Q16531 1140 aa14.03□□□□□ -0.16
RAB5C-208ENST00000551338 LMBR1LQ6UX01 489 aa14.03□□□□□ -0.16
RAB5C-208ENST00000551338 IL17RAQ96F46 866 aa14.03□□□□□ -0.16
RAB5C-208ENST00000551338 CCDC8Q9H0W5 538 aaPredicted RBP14.03□□□□□ -0.16
RAB5C-208ENST00000551338 SPEF2Q9C093 1822 aa14.03□□□□□ -0.16
RAB5C-208ENST00000551338 BTAF1O14981 1849 aa14.02□□□□□ -0.16
RAB5C-208ENST00000551338 LRP5O75197 1615 aa14.02□□□□□ -0.16
RAB5C-208ENST00000551338 MAP3K15Q6ZN16 1313 aa14.02□□□□□ -0.17
RAB5C-208ENST00000551338 SGSM2O43147 1006 aa14.02□□□□□ -0.17
RAB5C-208ENST00000551338 STARD3NLO95772 234 aa14.02□□□□□ -0.17
RAB5C-208ENST00000551338 KIF6Q6ZMV9 814 aa14.02□□□□□ -0.17
RAB5C-208ENST00000551338 BARGINQ6ZT62 677 aa14.02□□□□□ -0.17
RAB5C-208ENST00000551338 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
RAB5C-208ENST00000551338 ARAP2Q8WZ64 1704 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 NHSQ6T4R5 1651 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 ZNF609O15014 1411 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 RAD50Q92878 1312 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 MCCP23508 829 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
RAB5C-208ENST00000551338 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
RAB5C-208ENST00000551338 MARCH10Q8NA82 808 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-208ENST00000551338 SYTL4Q96C24 671 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-208ENST00000551338 PALD1Q9ULE6 856 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 ZBTB1Q9Y2K1 713 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-208ENST00000551338 SBF2Q86WG5 1849 aa14.01□□□□□ -0.17
RAB5C-208ENST00000551338 JCADQ9P266 1359 aa14□□□□□ -0.17
RAB5C-208ENST00000551338 ANAPC15P60006 121 aa14□□□□□ -0.17
RAB5C-208ENST00000551338 TFCP2Q12800 502 aa14□□□□□ -0.17
RAB5C-208ENST00000551338 TNNI3KQ59H18 835 aa14□□□□□ -0.17
RAB5C-208ENST00000551338 GIGYF2Q6Y7W6 1299 aaKnown RBP14□□□□□ -0.17
RAB5C-208ENST00000551338 EVI5LQ96CN4 794 aa14□□□□□ -0.17
RAB5C-208ENST00000551338 LSG1Q9H089 658 aaKnown RBP14□□□□□ -0.17
RAB5C-208ENST00000551338 CIZ1Q9ULV3 898 aaPredicted RBP14□□□□□ -0.17
RAB5C-208ENST00000551338 FPGT-TNNI3KV9GXZ4 949 aa14□□□□□ -0.17
RAB5C-208ENST00000551338 BCL9LQ86UU0 1499 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 SCN7AQ01118 1682 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 UBAP1LF5GYI3 381 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 PCCAP05165 728 aaPredicted RBP13.99□□□□□ -0.17
RAB5C-208ENST00000551338 ATG9AQ7Z3C6 839 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 PLA2G12BQ9BX93 195 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 DBNLQ9UJU6 430 aaKnown RBP13.99□□□□□ -0.17
RAB5C-208ENST00000551338 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 TAF1LQ8IZX4 1826 aa13.99□□□□□ -0.17
RAB5C-208ENST00000551338 CDHR2Q9BYE9 1310 aa13.98□□□□□ -0.17
RAB5C-208ENST00000551338 HSPA4P34932 840 aa13.98□□□□□ -0.17
RAB5C-208ENST00000551338 HLFQ16534 295 aa13.98□□□□□ -0.17
RAB5C-208ENST00000551338 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
RAB5C-208ENST00000551338 DIAPH3Q9NSV4 1193 aa13.98□□□□□ -0.17
RAB5C-208ENST00000551338 ST18O60284 1047 aa13.97□□□□□ -0.17
RAB5C-208ENST00000551338 IL6STP40189 918 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-208ENST00000551338 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
RAB5C-208ENST00000551338 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
RAB5C-208ENST00000551338 CCDC9Q9Y3X0 531 aaKnown RBP13.97□□□□□ -0.17
RAB5C-208ENST00000551338 LY75O60449 1722 aa13.97□□□□□ -0.17
RAB5C-208ENST00000551338 AKAP11Q9UKA4 1901 aa13.97□□□□□ -0.17
RAB5C-208ENST00000551338 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 MYO5AQ9Y4I1 1855 aaKnown RBP13.96□□□□□ -0.17
RAB5C-208ENST00000551338 EYA2O00167 538 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 ATP5JP18859 108 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 DEKP35659 375 aaKnown RBP13.96□□□□□ -0.17
RAB5C-208ENST00000551338 HSP90AB3PQ58FF7 597 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
RAB5C-208ENST00000551338 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 RUFY2Q8WXA3 655 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 ZNF594Q96JF6 807 aaPredicted RBP13.96□□□□□ -0.17
RAB5C-208ENST00000551338 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 GPR108Q9NPR9 543 aa13.96□□□□□ -0.17
RAB5C-208ENST00000551338 RIC1Q4ADV7 1423 aa13.96□□□□□ -0.18
RAB5C-208ENST00000551338 PALLDQ8WX93 1383 aa13.96□□□□□ -0.18
RAB5C-208ENST00000551338 MED23Q9ULK4 1368 aa13.96□□□□□ -0.18
RAB5C-208ENST00000551338 CIAO1O76071 339 aa13.95□□□□□ -0.18
RAB5C-208ENST00000551338 IL15P40933 162 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-208ENST00000551338 NMIQ13287 307 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-208ENST00000551338 VPS72Q15906 364 aa13.95□□□□□ -0.18
RAB5C-208ENST00000551338 ZBTB38Q8NAP3 1195 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-208ENST00000551338 SNRKQ9NRH2 765 aa13.95□□□□□ -0.18
RAB5C-208ENST00000551338 ERVV-1B6SEH8 477 aa13.94□□□□□ -0.18
RAB5C-208ENST00000551338 HIP1O00291 1037 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms