RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
ERBB3-215ENST00000550828 NIP7Q9Y221 180 aaKnown RBP eCLIP17.15■□□□□ 0.34
ERBB3-215ENST00000550828 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
ERBB3-215ENST00000550828 TRIM28Q13263 835 aaKnown RBP17.14■□□□□ 0.33
ERBB3-215ENST00000550828 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
ERBB3-215ENST00000550828 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
ERBB3-215ENST00000550828 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
ERBB3-215ENST00000550828 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
ERBB3-215ENST00000550828 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
ERBB3-215ENST00000550828 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
ERBB3-215ENST00000550828 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
ERBB3-215ENST00000550828 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
ERBB3-215ENST00000550828 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
ERBB3-215ENST00000550828 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
ERBB3-215ENST00000550828 NTSR2O95665 410 aa17.12■□□□□ 0.33
ERBB3-215ENST00000550828 MMP10P09238 476 aa17.12■□□□□ 0.33
ERBB3-215ENST00000550828 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
ERBB3-215ENST00000550828 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
ERBB3-215ENST00000550828 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
ERBB3-215ENST00000550828 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
ERBB3-215ENST00000550828 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
ERBB3-215ENST00000550828 IBTKQ9P2D0 1353 aaPredicted RBP17.12■□□□□ 0.33
ERBB3-215ENST00000550828 CASP7P55210 303 aa17.11■□□□□ 0.33
ERBB3-215ENST00000550828 GCKRQ14397 625 aa17.11■□□□□ 0.33
ERBB3-215ENST00000550828 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
ERBB3-215ENST00000550828 TAF1P21675 1872 aa17.11■□□□□ 0.33
ERBB3-215ENST00000550828 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 ALDH1L1O75891 902 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
ERBB3-215ENST00000550828 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
ERBB3-215ENST00000550828 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
ERBB3-215ENST00000550828 CCDC191Q8NCU4 936 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
ERBB3-215ENST00000550828 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
ERBB3-215ENST00000550828 PARP10Q53GL7 1025 aa17.09■□□□□ 0.33
ERBB3-215ENST00000550828 CCDC24Q8N4L8 307 aa17.09■□□□□ 0.33
ERBB3-215ENST00000550828 MEIS3Q99687 375 aa17.09■□□□□ 0.33
ERBB3-215ENST00000550828 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
ERBB3-215ENST00000550828 CACNA1SQ13698 1873 aa17.08■□□□□ 0.33
ERBB3-215ENST00000550828 DLEC1Q9Y238 1755 aa17.08■□□□□ 0.33
ERBB3-215ENST00000550828 COL4A1P02462 1669 aa17.08■□□□□ 0.32
ERBB3-215ENST00000550828 UTYO14607 1347 aa17.08■□□□□ 0.32
ERBB3-215ENST00000550828 SERPINB2P05120 415 aa17.08■□□□□ 0.32
ERBB3-215ENST00000550828 GPR162Q16538 588 aa17.08■□□□□ 0.32
ERBB3-215ENST00000550828 NUTM1Q86Y26 1132 aa17.08■□□□□ 0.32
ERBB3-215ENST00000550828 H7C1W4 665 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 GRM8O00222 908 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
ERBB3-215ENST00000550828 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
ERBB3-215ENST00000550828 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
ERBB3-215ENST00000550828 PRR5LQ6MZQ0 368 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
ERBB3-215ENST00000550828 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
ERBB3-215ENST00000550828 C10orf71Q711Q0 1435 aa17.06■□□□□ 0.32
ERBB3-215ENST00000550828 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
ERBB3-215ENST00000550828 PCCAP05165 728 aaPredicted RBP17.06■□□□□ 0.32
ERBB3-215ENST00000550828 NBPF7P0C2Y1 421 aaPredicted RBP17.06■□□□□ 0.32
ERBB3-215ENST00000550828 UBE3BQ7Z3V4 1068 aa17.06■□□□□ 0.32
ERBB3-215ENST00000550828 ZBTB38Q8NAP3 1195 aaPredicted RBP17.06■□□□□ 0.32
ERBB3-215ENST00000550828 KAZALD1Q96I82 304 aa17.06■□□□□ 0.32
ERBB3-215ENST00000550828 RIC1Q4ADV7 1423 aa17.05■□□□□ 0.32
ERBB3-215ENST00000550828 MS4A1P11836 297 aa17.05■□□□□ 0.32
ERBB3-215ENST00000550828 POLD1P28340 1107 aa17.05■□□□□ 0.32
ERBB3-215ENST00000550828 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
ERBB3-215ENST00000550828 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
ERBB3-215ENST00000550828 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
ERBB3-215ENST00000550828 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
ERBB3-215ENST00000550828 PPP1R42Q7Z4L9 355 aa17.04■□□□□ 0.32
ERBB3-215ENST00000550828 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
ERBB3-215ENST00000550828 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
ERBB3-215ENST00000550828 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
ERBB3-215ENST00000550828 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
ERBB3-215ENST00000550828 CDHR2Q9BYE9 1310 aa17.03■□□□□ 0.32
ERBB3-215ENST00000550828 HCLS1P14317 486 aaPredicted RBP17.03■□□□□ 0.32
ERBB3-215ENST00000550828 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
ERBB3-215ENST00000550828 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
ERBB3-215ENST00000550828 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.32
ERBB3-215ENST00000550828 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.32
ERBB3-215ENST00000550828 IRS4O14654 1257 aaPredicted RBP17.01■□□□□ 0.31
ERBB3-215ENST00000550828 FOXO4P98177 505 aa17.01■□□□□ 0.31
ERBB3-215ENST00000550828 TPTE2Q6XPS3 522 aa17.01■□□□□ 0.31
ERBB3-215ENST00000550828 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
ERBB3-215ENST00000550828 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
ERBB3-215ENST00000550828 ZBTB40Q9NUA8 1239 aa17.01■□□□□ 0.31
ERBB3-215ENST00000550828 A0A1B0GUL6 1792 aa17■□□□□ 0.31
ERBB3-215ENST00000550828 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
ERBB3-215ENST00000550828 PLA2G12BQ9BX93 195 aa17■□□□□ 0.31
ERBB3-215ENST00000550828 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
ERBB3-215ENST00000550828 LRRFIP2Q9Y608 721 aaKnown RBP17■□□□□ 0.31
ERBB3-215ENST00000550828 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
ERBB3-215ENST00000550828 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
ERBB3-215ENST00000550828 BICC1Q9H694 974 aaKnown RBP16.99■□□□□ 0.31
ERBB3-215ENST00000550828 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms