RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 NLRP3Q96P20 1036 aa25.9■■□□□ 1.74
GCN1-207ENST00000550471 NTSR2O95665 410 aa25.89■■□□□ 1.74
GCN1-207ENST00000550471 NCBP3Q53F19 620 aaKnown RBP25.89■■□□□ 1.74
GCN1-207ENST00000550471 SLC10A5Q5PT55 438 aa25.89■■□□□ 1.74
GCN1-207ENST00000550471 NUTM1Q86Y26 1132 aa25.89■■□□□ 1.74
GCN1-207ENST00000550471 SMC1BQ8NDV3 1235 aa25.89■■□□□ 1.74
GCN1-207ENST00000550471 CRAMP1Q96RY5 1269 aa25.89■■□□□ 1.74
GCN1-207ENST00000550471 TMX4Q9H1E5 349 aaPredicted RBP25.89■■□□□ 1.74
GCN1-207ENST00000550471 HYPKQ9NX55 129 aa25.89■■□□□ 1.74
GCN1-207ENST00000550471 ZNF316A6NFI3 1004 aaPredicted RBP25.88■■□□□ 1.73
GCN1-207ENST00000550471 ZNF853P0CG23 659 aa25.88■■□□□ 1.73
GCN1-207ENST00000550471 XAGE3Q8WTP9 111 aa25.88■■□□□ 1.73
GCN1-207ENST00000550471 DICER1Q9UPY3 1922 aaKnown RBP25.88■■□□□ 1.73
GCN1-207ENST00000550471 ABCC12Q96J65 1359 aa25.87■■□□□ 1.73
GCN1-207ENST00000550471 TCIRG1Q13488 830 aa25.87■■□□□ 1.73
GCN1-207ENST00000550471 PROSER3Q2NL68 480 aa25.87■■□□□ 1.73
GCN1-207ENST00000550471 TIAM2Q8IVF5 1701 aa25.86■■□□□ 1.73
GCN1-207ENST00000550471 ANP32CO43423 234 aa25.86■■□□□ 1.73
GCN1-207ENST00000550471 PLBD2Q8NHP8 589 aa25.86■■□□□ 1.73
GCN1-207ENST00000550471 PSMD1Q99460 953 aa25.86■■□□□ 1.73
GCN1-207ENST00000550471 MBIPQ9NS73 344 aa25.86■■□□□ 1.73
GCN1-207ENST00000550471 AIMP1Q12904 312 aaKnown RBP25.85■■□□□ 1.73
GCN1-207ENST00000550471 DUSP27Q5VZP5 1158 aa25.85■■□□□ 1.73
GCN1-207ENST00000550471 CHPF2Q9P2E5 772 aa25.85■■□□□ 1.73
GCN1-207ENST00000550471 CCDC88AQ3V6T2 1871 aa25.85■■□□□ 1.73
GCN1-207ENST00000550471 CCDC27Q2M243 656 aa25.84■■□□□ 1.73
GCN1-207ENST00000550471 ANKRD13DQ6ZTN6 518 aa25.84■■□□□ 1.73
GCN1-207ENST00000550471 NECTIN2Q92692 538 aa25.84■■□□□ 1.73
GCN1-207ENST00000550471 ANXA1P04083 346 aa25.83■■□□□ 1.73
GCN1-207ENST00000550471 IQCA1LA6NCM1 817 aa25.82■■□□□ 1.72
GCN1-207ENST00000550471 NLRP10Q86W26 655 aa25.82■■□□□ 1.72
GCN1-207ENST00000550471 WDR90Q96KV7 1748 aa25.82■■□□□ 1.72
GCN1-207ENST00000550471 SH3TC1Q8TE82 1336 aa25.82■■□□□ 1.72
GCN1-207ENST00000550471 CACNA1SQ13698 1873 aa25.81■■□□□ 1.72
GCN1-207ENST00000550471 HSP90B1P14625 803 aaKnown RBP25.81■■□□□ 1.72
GCN1-207ENST00000550471 KRT24Q2M2I5 525 aa25.81■■□□□ 1.72
GCN1-207ENST00000550471 VPS33BQ9H267 617 aa25.81■■□□□ 1.72
GCN1-207ENST00000550471 IARSP41252 1262 aaKnown RBP25.8■■□□□ 1.72
GCN1-207ENST00000550471 JDP2Q8WYK2 163 aa25.8■■□□□ 1.72
GCN1-207ENST00000550471 TRMT112Q9UI30 125 aaKnown RBP25.8■■□□□ 1.72
GCN1-207ENST00000550471 BBOX1O75936 387 aa25.79■■□□□ 1.72
GCN1-207ENST00000550471 SYNE4Q8N205 404 aa25.79■■□□□ 1.72
GCN1-207ENST00000550471 PPEF1O14829 653 aaPredicted RBP25.78■■□□□ 1.72
GCN1-207ENST00000550471 TRIM28Q13263 835 aaKnown RBP25.78■■□□□ 1.72
GCN1-207ENST00000550471 TMC4Q7Z404 712 aa25.78■■□□□ 1.72
GCN1-207ENST00000550471 L3MBTL3Q96JM7 780 aaPredicted RBP25.78■■□□□ 1.72
GCN1-207ENST00000550471 ANKRD36CQ5JPF3 1778 aa25.77■■□□□ 1.72
GCN1-207ENST00000550471 GOLGA2Q08379 1002 aa25.77■■□□□ 1.72
GCN1-207ENST00000550471 CCDC30Q5VVM6 783 aa25.77■■□□□ 1.72
GCN1-207ENST00000550471 ZNF277Q9NRM2 450 aaPredicted RBP25.77■■□□□ 1.72
GCN1-207ENST00000550471 DDX46Q7L014 1031 aaKnown RBP25.76■■□□□ 1.71
GCN1-207ENST00000550471 SUPT20HQ8NEM7 779 aa25.76■■□□□ 1.71
GCN1-207ENST00000550471 MRS2Q9HD23 443 aa25.76■■□□□ 1.71
GCN1-207ENST00000550471 IL16Q14005 1332 aa25.75■■□□□ 1.71
GCN1-207ENST00000550471 DDX58O95786 925 aaKnown RBP25.75■■□□□ 1.71
GCN1-207ENST00000550471 ISCA1Q9BUE6 129 aa25.75■■□□□ 1.71
GCN1-207ENST00000550471 ATP6V0A2Q9Y487 856 aa25.75■■□□□ 1.71
GCN1-207ENST00000550471 SNED1Q8TER0 1413 aa25.74■■□□□ 1.71
GCN1-207ENST00000550471 POTECB2RU33 542 aa25.74■■□□□ 1.71
GCN1-207ENST00000550471 FZD9O00144 591 aa25.74■■□□□ 1.71
GCN1-207ENST00000550471 DDNO94850 711 aaPredicted RBP25.74■■□□□ 1.71
GCN1-207ENST00000550471 RIC3Q7Z5B4 369 aa25.73■■□□□ 1.71
GCN1-207ENST00000550471 EIF6P56537 245 aaKnown RBP25.72■■□□□ 1.71
GCN1-207ENST00000550471 SP8Q8IXZ3 490 aa25.72■■□□□ 1.71
GCN1-207ENST00000550471 GPC2Q8N158 579 aa25.72■■□□□ 1.71
GCN1-207ENST00000550471 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
GCN1-207ENST00000550471 ABCC4O15439 1325 aa25.7■■□□□ 1.71
GCN1-207ENST00000550471 GRAPQ13588 217 aa25.7■■□□□ 1.7
GCN1-207ENST00000550471 OLFM4Q6UX06 510 aa25.7■■□□□ 1.7
GCN1-207ENST00000550471 GRAPLQ8TC17 118 aaPredicted RBP25.7■■□□□ 1.7
GCN1-207ENST00000550471 SCN4AP35499 1836 aa25.7■■□□□ 1.7
GCN1-207ENST00000550471 HCLS1P14317 486 aaPredicted RBP25.69■■□□□ 1.7
GCN1-207ENST00000550471 SF3B3Q15393 1217 aaKnown RBP25.69■■□□□ 1.7
GCN1-207ENST00000550471 CHADLQ6NUI6 762 aa25.69■■□□□ 1.7
GCN1-207ENST00000550471 C3orf67Q6ZVT6 689 aa25.69■■□□□ 1.7
GCN1-207ENST00000550471 PNMA8AQ86V59 439 aaPredicted RBP25.69■■□□□ 1.7
GCN1-207ENST00000550471 LARGE2Q8N3Y3 721 aa25.69■■□□□ 1.7
GCN1-207ENST00000550471 STK31Q9BXU1 1019 aa25.69■■□□□ 1.7
GCN1-207ENST00000550471 ELL2O00472 640 aaPredicted RBP25.68■■□□□ 1.7
GCN1-207ENST00000550471 CCDC184Q52MB2 194 aa25.68■■□□□ 1.7
GCN1-207ENST00000550471 C8orf58Q8NAV2 365 aa25.68■■□□□ 1.7
GCN1-207ENST00000550471 CCDC191Q8NCU4 936 aa25.68■■□□□ 1.7
GCN1-207ENST00000550471 RTFDC1Q9BY42 306 aaPredicted RBP25.68■■□□□ 1.7
GCN1-207ENST00000550471 HACL1Q9UJ83 578 aa25.68■■□□□ 1.7
GCN1-207ENST00000550471 LDHDQ86WU2 507 aa25.67■■□□□ 1.7
GCN1-207ENST00000550471 DNAJC5GQ8N7S2 189 aa25.67■■□□□ 1.7
GCN1-207ENST00000550471 ZBTB38Q8NAP3 1195 aaPredicted RBP25.67■■□□□ 1.7
GCN1-207ENST00000550471 DPP8Q6V1X1 898 aaPredicted RBP25.66■■□□□ 1.7
GCN1-207ENST00000550471 WDR63Q8IWG1 891 aa25.66■■□□□ 1.7
GCN1-207ENST00000550471 NIM1KQ8IY84 436 aa25.66■■□□□ 1.7
GCN1-207ENST00000550471 TAF1DQ9H5J8 278 aaPredicted RBP25.66■■□□□ 1.7
GCN1-207ENST00000550471 ATP5J2-PTCD1G3V325 749 aa25.65■■□□□ 1.7
GCN1-207ENST00000550471 MPNDQ8N594 471 aa25.65■■□□□ 1.7
GCN1-207ENST00000550471 ZNF541Q9H0D2 1346 aa25.64■■□□□ 1.7
GCN1-207ENST00000550471 PPIP5K2O43314 1243 aa25.64■■□□□ 1.7
GCN1-207ENST00000550471 KLRG1Q96E93 195 aa25.64■■□□□ 1.7
GCN1-207ENST00000550471 FAM89AQ96GI7 184 aa25.64■■□□□ 1.7
GCN1-207ENST00000550471 PHAXQ9H814 394 aaKnown RBP25.64■■□□□ 1.7
GCN1-207ENST00000550471 IRS4O14654 1257 aaPredicted RBP25.63■■□□□ 1.69
GCN1-207ENST00000550471 LMOD1P29536 600 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms