RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 IRX3P78415 501 aaPredicted RBP14.21□□□□□ -0.13
VDR-208ENST00000550325 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.13
VDR-208ENST00000550325 SDF4Q9BRK5 362 aa14.21□□□□□ -0.13
VDR-208ENST00000550325 RBM8AQ9Y5S9 174 aaKnown RBP14.21□□□□□ -0.13
VDR-208ENST00000550325 JAK2O60674 1132 aa14.21□□□□□ -0.13
VDR-208ENST00000550325 KINO60870 393 aaKnown RBP14.21□□□□□ -0.13
VDR-208ENST00000550325 PNMA6AP0CW24 399 aaPredicted RBP14.21□□□□□ -0.13
VDR-208ENST00000550325 CCDC191Q8NCU4 936 aa14.21□□□□□ -0.13
VDR-208ENST00000550325 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.14
VDR-208ENST00000550325 BIN1O00499 593 aa14.21□□□□□ -0.14
VDR-208ENST00000550325 CYP2C19P33261 490 aa14.21□□□□□ -0.14
VDR-208ENST00000550325 TPM4P67936 248 aa14.21□□□□□ -0.14
VDR-208ENST00000550325 COL9A3Q14050 684 aaPredicted RBP14.21□□□□□ -0.14
VDR-208ENST00000550325 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.14
VDR-208ENST00000550325 CCAR1Q8IX12 1150 aaKnown RBP14.21□□□□□ -0.14
VDR-208ENST00000550325 PGBD1Q96JS3 809 aa14.21□□□□□ -0.14
VDR-208ENST00000550325 FTOQ9C0B1 505 aaKnown RBP eCLIP14.21□□□□□ -0.14
VDR-208ENST00000550325 NEMFO60524 1076 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 IFIT2P09913 472 aaKnown RBP14.2□□□□□ -0.14
VDR-208ENST00000550325 SKIDA1Q1XH10 827 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 ISM2Q6H9L7 571 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 GUCY1B3Q02153 619 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 ST3GAL1Q11201 340 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 GPS2Q13227 327 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 FEZ2Q9UHY8 353 aaPredicted RBP14.2□□□□□ -0.14
VDR-208ENST00000550325 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
VDR-208ENST00000550325 ST5P78524 1137 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 STX1AQ16623 288 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 CCDC30Q5VVM6 783 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 KIF1BPQ96EK5 621 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 SIL1Q9H173 461 aa14.2□□□□□ -0.14
VDR-208ENST00000550325 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.14
VDR-208ENST00000550325 ME1P48163 572 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 LMAN1P49257 510 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 PI4K2BQ8TCG2 481 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 BRF1Q92994 677 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 TRIM66O15016 1216 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 RNF20Q5VTR2 975 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 CREB3L3Q68CJ9 461 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 NYAP1Q6ZVC0 841 aa14.19□□□□□ -0.14
VDR-208ENST00000550325 KIAA0232Q92628 1395 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 PTPN21Q16825 1174 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CEP57L1Q8IYX8 460 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CLASRPQ8N2M8 674 aaKnown RBP14.18□□□□□ -0.14
VDR-208ENST00000550325 USP44Q9H0E7 712 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
VDR-208ENST00000550325 ABCC3O15438 1527 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CCZ1BP86790 482 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CCZ1P86791 482 aaPredicted RBP14.18□□□□□ -0.14
VDR-208ENST00000550325 FHOD1Q9Y613 1164 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 CHMP4CQ96CF2 233 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 TSPYL1Q9H0U9 437 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 ZSWIM4Q9H7M6 989 aa14.18□□□□□ -0.14
VDR-208ENST00000550325 PHAXQ9H814 394 aaKnown RBP14.18□□□□□ -0.14
VDR-208ENST00000550325 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.18□□□□□ -0.14
VDR-208ENST00000550325 PSMA5P28066 241 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 OAS2P29728 719 aaKnown RBP14.17□□□□□ -0.14
VDR-208ENST00000550325 PLA2G4AP47712 749 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 SMARCE1Q969G3 411 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 CARD6Q9BX69 1037 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.17□□□□□ -0.14
VDR-208ENST00000550325 EFCAB6Q5THR3 1501 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 AEBP2Q6ZN18 517 aaPredicted RBP14.17□□□□□ -0.14
VDR-208ENST00000550325 IFNKQ9P0W0 207 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 GLRX3O76003 335 aaKnown RBP14.17□□□□□ -0.14
VDR-208ENST00000550325 PPP1R13BQ96KQ4 1090 aa14.17□□□□□ -0.14
VDR-208ENST00000550325 INO80Q9ULG1 1556 aaPredicted RBP14.16□□□□□ -0.14
VDR-208ENST00000550325 ADGRB3O60242 1522 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 KIF2AO00139 706 aaPredicted RBP14.16□□□□□ -0.14
VDR-208ENST00000550325 ANXA1P04083 346 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 MRFAP1L1Q96HT8 127 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 FSD1Q9BTV5 496 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 MTHFSDQ2M296 383 aaKnown RBP14.16□□□□□ -0.14
VDR-208ENST00000550325 TXLNBQ8N3L3 684 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
VDR-208ENST00000550325 GPATCH3Q96I76 525 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 ANO10Q9NW15 660 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 PA2G4Q9UQ80 394 aaKnown RBP14.16□□□□□ -0.14
VDR-208ENST00000550325 SF3A1Q15459 793 aaKnown RBP14.16□□□□□ -0.14
VDR-208ENST00000550325 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 AACSQ86V21 672 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 FSIP1Q8NA03 581 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
VDR-208ENST00000550325 CD163L1Q9NR16 1453 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 ELP1O95163 1332 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 NBPF7P0C2Y1 421 aaPredicted RBP14.15□□□□□ -0.14
VDR-208ENST00000550325 IQCB1Q15051 598 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 TXNDC2Q86VQ3 553 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 CCDC8Q9H0W5 538 aaPredicted RBP14.15□□□□□ -0.14
VDR-208ENST00000550325 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 NAT10Q9H0A0 1025 aaKnown RBP14.15□□□□□ -0.14
VDR-208ENST00000550325 GOLGA8FQ08AF8 430 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 GOLGA8DPQ0D2H9 430 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms