RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SCN7AQ01118 1682 aa21.75■■□□□ 1.07
LETMD1-220ENST00000549686 BCORQ6W2J9 1755 aa21.75■■□□□ 1.07
LETMD1-220ENST00000549686 HSP90B1P14625 803 aaKnown RBP21.75■■□□□ 1.07
LETMD1-220ENST00000549686 CEP85Q6P2H3 762 aa21.75■■□□□ 1.07
LETMD1-220ENST00000549686 AMIGO3Q86WK7 504 aa21.75■■□□□ 1.07
LETMD1-220ENST00000549686 NIP7Q9Y221 180 aaKnown RBP eCLIP21.75■■□□□ 1.07
LETMD1-220ENST00000549686 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
LETMD1-220ENST00000549686 GPTP24298 496 aa21.74■■□□□ 1.07
LETMD1-220ENST00000549686 CASP7P55210 303 aa21.74■■□□□ 1.07
LETMD1-220ENST00000549686 UBE3BQ7Z3V4 1068 aa21.74■■□□□ 1.07
LETMD1-220ENST00000549686 PPP1R42Q7Z4L9 355 aa21.74■■□□□ 1.07
LETMD1-220ENST00000549686 DEFB132Q7Z7B7 95 aa21.74■■□□□ 1.07
LETMD1-220ENST00000549686 SLC15A2Q16348 729 aa21.73■■□□□ 1.07
LETMD1-220ENST00000549686 BCL2L12Q9HB09 334 aa21.73■■□□□ 1.07
LETMD1-220ENST00000549686 SRP68Q9UHB9 627 aaKnown RBP21.73■■□□□ 1.07
LETMD1-220ENST00000549686 CDHR2Q9BYE9 1310 aa21.73■■□□□ 1.07
LETMD1-220ENST00000549686 ANKRD36CQ5JPF3 1778 aa21.72■■□□□ 1.07
LETMD1-220ENST00000549686 ATP8B2P98198 1209 aa21.72■■□□□ 1.07
LETMD1-220ENST00000549686 MTX1Q13505 466 aa21.72■■□□□ 1.07
LETMD1-220ENST00000549686 UTP14AQ9BVJ6 771 aaKnown RBP21.72■■□□□ 1.07
LETMD1-220ENST00000549686 UBN2Q6ZU65 1347 aa21.72■■□□□ 1.07
LETMD1-220ENST00000549686 NUP98P52948 1817 aa21.71■■□□□ 1.07
LETMD1-220ENST00000549686 SUCLG2Q96I99 432 aa21.71■■□□□ 1.07
LETMD1-220ENST00000549686 SETDB2Q96T68 719 aa21.71■■□□□ 1.07
LETMD1-220ENST00000549686 PLA2G12BQ9BX93 195 aa21.71■■□□□ 1.07
LETMD1-220ENST00000549686 NYXQ9GZU5 481 aa21.71■■□□□ 1.07
LETMD1-220ENST00000549686 TRMT112Q9UI30 125 aaKnown RBP21.71■■□□□ 1.07
LETMD1-220ENST00000549686 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
LETMD1-220ENST00000549686 SMIM5Q71RC9 77 aa21.7■■□□□ 1.06
LETMD1-220ENST00000549686 UPF1Q92900 1129 aaKnown RBP eCLIP21.7■■□□□ 1.061e-8■□□□□ 9.9
LETMD1-220ENST00000549686 AFDNP55196 1824 aaKnown RBP21.7■■□□□ 1.06
LETMD1-220ENST00000549686 SH3TC1Q8TE82 1336 aa21.7■■□□□ 1.06
LETMD1-220ENST00000549686 GYS1P13807 737 aa21.69■■□□□ 1.06
LETMD1-220ENST00000549686 SUSD4Q5VX71 490 aa21.69■■□□□ 1.06
LETMD1-220ENST00000549686 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
LETMD1-220ENST00000549686 SIRT2Q8IXJ6 389 aa21.69■■□□□ 1.06
LETMD1-220ENST00000549686 GCC1Q96CN9 775 aa21.69■■□□□ 1.06
LETMD1-220ENST00000549686 C4AP0C0L4 1744 aa21.69■■□□□ 1.06
LETMD1-220ENST00000549686 IGHDP01880 384 aa21.68■■□□□ 1.06
LETMD1-220ENST00000549686 RABL6Q3YEC7 729 aaPredicted RBP21.68■■□□□ 1.06
LETMD1-220ENST00000549686 COL23A1Q86Y22 540 aaPredicted RBP21.68■■□□□ 1.06
LETMD1-220ENST00000549686 NLGN1Q8N2Q7 840 aa21.68■■□□□ 1.06
LETMD1-220ENST00000549686 KAZALD1Q96I82 304 aa21.68■■□□□ 1.06
LETMD1-220ENST00000549686 BICC1Q9H694 974 aaKnown RBP21.68■■□□□ 1.06
LETMD1-220ENST00000549686 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
LETMD1-220ENST00000549686 PNPLA7Q6ZV29 1317 aa21.68■■□□□ 1.06
LETMD1-220ENST00000549686 CARMIL3Q8ND23 1372 aa21.67■■□□□ 1.06
LETMD1-220ENST00000549686 NTSR2O95665 410 aa21.67■■□□□ 1.06
LETMD1-220ENST00000549686 SSH3Q8TE77 659 aa21.67■■□□□ 1.06
LETMD1-220ENST00000549686 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
LETMD1-220ENST00000549686 IRS4O14654 1257 aaPredicted RBP21.66■■□□□ 1.06
LETMD1-220ENST00000549686 SRGAP3O43295 1099 aa21.66■■□□□ 1.06
LETMD1-220ENST00000549686 POLA2Q14181 598 aa21.66■■□□□ 1.06
LETMD1-220ENST00000549686 MSH5O43196 834 aa21.65■■□□□ 1.06
LETMD1-220ENST00000549686 TPTE2Q6XPS3 522 aa21.65■■□□□ 1.06
LETMD1-220ENST00000549686 BICDL1Q6ZP65 573 aa21.65■■□□□ 1.06
LETMD1-220ENST00000549686 SMC5Q8IY18 1101 aa21.65■■□□□ 1.06
LETMD1-220ENST00000549686 DCTPP1Q9H773 170 aa21.65■■□□□ 1.06
LETMD1-220ENST00000549686 PDE8AO60658 829 aa21.64■■□□□ 1.05
LETMD1-220ENST00000549686 FOXO4P98177 505 aa21.64■■□□□ 1.05
LETMD1-220ENST00000549686 NFIXQ14938 502 aa21.64■■□□□ 1.05
LETMD1-220ENST00000549686 NBPF5PQ86XG9 351 aaPredicted RBP21.64■■□□□ 1.05
LETMD1-220ENST00000549686 JARID2Q92833 1246 aaPredicted RBP21.64■■□□□ 1.05
LETMD1-220ENST00000549686 QSER1Q2KHR3 1735 aa21.63■■□□□ 1.05
LETMD1-220ENST00000549686 PNMA6EA0A0J9YXQ4 647 aa21.63■■□□□ 1.05
LETMD1-220ENST00000549686 TM4SF1P30408 202 aa21.63■■□□□ 1.05
LETMD1-220ENST00000549686 HSP90AB4PQ58FF6 505 aa21.63■■□□□ 1.05
LETMD1-220ENST00000549686 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
LETMD1-220ENST00000549686 EPHA10Q5JZY3 1008 aa21.63■■□□□ 1.05
LETMD1-220ENST00000549686 GTF2E1P29083 439 aaPredicted RBP21.62■■□□□ 1.05
LETMD1-220ENST00000549686 SLC10A5Q5PT55 438 aa21.62■■□□□ 1.05
LETMD1-220ENST00000549686 LMBR1LQ6UX01 489 aa21.62■■□□□ 1.05
LETMD1-220ENST00000549686 COL24A1Q17RW2 1714 aa21.61■■□□□ 1.05
LETMD1-220ENST00000549686 CSF1RP07333 972 aa21.61■■□□□ 1.05
LETMD1-220ENST00000549686 CTSWP56202 376 aa21.61■■□□□ 1.05
LETMD1-220ENST00000549686 FAM177BA6PVY3 158 aa21.6■■□□□ 1.05
LETMD1-220ENST00000549686 SLC16A10Q8TF71 515 aa21.6■■□□□ 1.05
LETMD1-220ENST00000549686 NOP58Q9Y2X3 529 aaKnown RBP21.6■■□□□ 1.05
LETMD1-220ENST00000549686 RAB11FIP3O75154 756 aa21.59■■□□□ 1.05
LETMD1-220ENST00000549686 CNBD1Q8NA66 436 aa21.59■■□□□ 1.05
LETMD1-220ENST00000549686 TUBGCP6Q96RT7 1819 aa21.59■■□□□ 1.05
LETMD1-220ENST00000549686 RIC1Q4ADV7 1423 aa21.58■■□□□ 1.05
LETMD1-220ENST00000549686 NPHP1O15259 732 aa21.58■■□□□ 1.05
LETMD1-220ENST00000549686 ERFEQ4G0M1 354 aa21.58■■□□□ 1.05
LETMD1-220ENST00000549686 TTLL11Q8NHH1 800 aa21.58■■□□□ 1.05
LETMD1-220ENST00000549686 COPRSQ9NQ92 184 aa21.58■■□□□ 1.05
LETMD1-220ENST00000549686 ZBTB47Q9UFB7 747 aaPredicted RBP21.58■■□□□ 1.05
LETMD1-220ENST00000549686 CHMP3Q9Y3E7 222 aa21.58■■□□□ 1.05
LETMD1-220ENST00000549686 SERPINB2P05120 415 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 ST5P78524 1137 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 CCDC57Q2TAC2 916 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 CCDC152Q4G0S7 254 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 NUTM1Q86Y26 1132 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 SYNE4Q8N205 404 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 RTL9Q8NET4 1388 aa21.57■■□□□ 1.04
LETMD1-220ENST00000549686 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
LETMD1-220ENST00000549686 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
LETMD1-220ENST00000549686 HCLS1P14317 486 aaPredicted RBP21.56■■□□□ 1.04
LETMD1-220ENST00000549686 RFX5P48382 616 aaPredicted RBP21.56■■□□□ 1.04
LETMD1-220ENST00000549686 NUCB1Q02818 461 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms