RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 SSRP1Q08945 709 aaKnown RBP10.8□□□□□ -0.68
PPFIA2-216ENST00000549396 KANK3Q6NY19 840 aa10.8□□□□□ -0.68
PPFIA2-216ENST00000549396 PLBD2Q8NHP8 589 aa10.8□□□□□ -0.68
PPFIA2-216ENST00000549396 LIMCH1Q9UPQ0 1083 aa10.8□□□□□ -0.68
PPFIA2-216ENST00000549396 A2ML1A8K2U0 1454 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 CHRNA2Q15822 529 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 DZIP3Q86Y13 1208 aaKnown RBP10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 CCDC148Q8NFR7 591 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 SPATA32Q96LK8 384 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 THUMPD2Q9BTF0 503 aaKnown RBP10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 ZBTB3Q9H5J0 574 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 LMTK2Q8IWU2 1503 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 LAMC1P11047 1609 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 PDE6BP35913 854 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 MTHFSDQ2M296 383 aaKnown RBP10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 HOMER1Q86YM7 354 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 XAGE3Q8WTP9 111 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 EYA1Q99502 592 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 ATP2B3Q16720 1220 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 TTC22Q5TAA0 569 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 CNKSR2Q8WXI2 1034 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 C8orf37Q96NL8 207 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 RTL9Q8NET4 1388 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 SPATA31E1Q6ZUB1 1445 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 ADGRL3Q9HAR2 1447 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 CCDC191Q8NCU4 936 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
PPFIA2-216ENST00000549396 NF2P35240 595 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 ME1P48163 572 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 AMPD3Q01432 767 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 RHPN1Q8TCX5 695 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 MIS18AQ9NYP9 233 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 TSG101Q99816 390 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 IL13P35225 146 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 NUCB1Q02818 461 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
PPFIA2-216ENST00000549396 MTERF4Q7Z6M4 381 aaKnown RBP10.77□□□□□ -0.68
PPFIA2-216ENST00000549396 CHPF2Q9P2E5 772 aa10.77□□□□□ -0.68
PPFIA2-216ENST00000549396 TNNI2P48788 182 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 IQCEQ6IPM2 695 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 MFSD6Q6ZSS7 791 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 PPFIBP1Q86W92 1011 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 TRAK2O60296 914 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 PRDM15P57071 1507 aaPredicted RBP10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 COPS6Q7L5N1 327 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 OGFOD1Q8N543 542 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 ZSCAN16Q9H4T2 348 aaPredicted RBP10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 KAT14Q9H8E8 782 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 DENND2AQ9ULE3 1009 aa10.77□□□□□ -0.69
PPFIA2-216ENST00000549396 ESR2Q92731 530 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 BOLA2Q9H3K6 86 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 GOLGA8AA7E2F4 631 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 MCM5P33992 734 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 NASPP49321 788 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 C8orf76Q96K31 380 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 NUP62CLQ9H1M0 184 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 SLC52A2Q9HAB3 445 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 MNS1Q8NEH6 495 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 GLT8D2Q9H1C3 349 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 STK24Q9Y6E0 443 aa10.76□□□□□ -0.69
PPFIA2-216ENST00000549396 ZC3H13Q5T200 1668 aaKnown RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 CCDC194A0A1B0GVG4 234 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 KIF2AO00139 706 aaPredicted RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 IFIT3O14879 490 aaKnown RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 PRPF40BQ6NWY9 871 aaKnown RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 BTG4Q9NY30 223 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 THRAP3Q9Y2W1 955 aaKnown RBP10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 ERLIN2O94905 339 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 TEX35Q5T0J7 233 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 TMC4Q7Z404 712 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 RUFY1Q96T51 708 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 AGLP35573 1532 aa10.75□□□□□ -0.69
PPFIA2-216ENST00000549396 PLA2R1Q13018 1463 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 ERMNQ8TAM6 284 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 METTL22Q9BUU2 404 aaPredicted RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 TRIM5Q9C035 493 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 DDX19AQ9NUU7 478 aaKnown RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 GPTP24298 496 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 CCDC96Q2M329 555 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 MCMDC2Q4G0Z9 681 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 ZNF397Q8NF99 534 aaPredicted RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 GLI2P10070 1586 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 F6X3S4 739 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms