RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
USP15-213ENST00000549268 NEURL1BA8MQ27 555 aa9.52□□□□□ -0.89
USP15-213ENST00000549268 SHISA8B8ZZ34 492 aa9.52□□□□□ -0.89
USP15-213ENST00000549268 PTCD1O75127 700 aaKnown RBP9.52□□□□□ -0.89
USP15-213ENST00000549268 SIN3BO75182 1162 aa9.52□□□□□ -0.89
USP15-213ENST00000549268 DGKZQ13574 1117 aa9.52□□□□□ -0.89
USP15-213ENST00000549268 C11orf16Q9NQ32 467 aa9.52□□□□□ -0.89
USP15-213ENST00000549268 SPEM2Q0P670 501 aa9.51□□□□□ -0.89
USP15-213ENST00000549268 NEUROD1Q13562 356 aa9.51□□□□□ -0.89
USP15-213ENST00000549268 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
USP15-213ENST00000549268 KLK14Q9P0G3 267 aa9.51□□□□□ -0.89
USP15-213ENST00000549268 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 INPP5BP32019 993 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 COX20Q5RI15 118 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 FCHSD1Q86WN1 690 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 SLC30A3Q99726 388 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 MDFIQ99750 246 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
USP15-213ENST00000549268 GSK3AP49840 483 aa9.49□□□□□ -0.89
USP15-213ENST00000549268 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
USP15-213ENST00000549268 SYT9Q86SS6 491 aa9.49□□□□□ -0.89
USP15-213ENST00000549268 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
USP15-213ENST00000549268 BTBD6Q96KE9 485 aa9.49□□□□□ -0.89
USP15-213ENST00000549268 ADARB2-AS1A8MUL3 147 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 EPB42P16452 691 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 GRIN2CQ14957 1233 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 C16orf46Q6P387 395 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 TNFRSF25Q93038 417 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
USP15-213ENST00000549268 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
USP15-213ENST00000549268 MICAL2O94851 1124 aa9.47□□□□□ -0.89
USP15-213ENST00000549268 HOXB4P17483 251 aaPredicted RBP9.47□□□□□ -0.89
USP15-213ENST00000549268 ATP2B4P23634 1241 aa9.47□□□□□ -0.89
USP15-213ENST00000549268 IDH3AP50213 366 aa9.47□□□□□ -0.89
USP15-213ENST00000549268 B4GALNT3Q6L9W6 998 aa9.47□□□□□ -0.89
USP15-213ENST00000549268 PODNQ7Z5L7 613 aa9.47□□□□□ -0.89
USP15-213ENST00000549268 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
USP15-213ENST00000549268 ELOA3DA6NLF2 546 aaPredicted RBP9.46□□□□□ -0.9
USP15-213ENST00000549268 ARSDP51689 593 aa9.46□□□□□ -0.9
USP15-213ENST00000549268 ELOA3BQ3SY89 546 aa9.46□□□□□ -0.9
USP15-213ENST00000549268 ELOA3Q8NG57 546 aa9.46□□□□□ -0.9
USP15-213ENST00000549268 GSX2Q9BZM3 304 aa9.46□□□□□ -0.9
USP15-213ENST00000549268 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
USP15-213ENST00000549268 RASSF7Q02833 373 aa9.45□□□□□ -0.9
USP15-213ENST00000549268 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
USP15-213ENST00000549268 CNTNAP5Q8WYK1 1306 aa9.45□□□□□ -0.9
USP15-213ENST00000549268 OPLAHO14841 1288 aa9.44□□□□□ -0.9
USP15-213ENST00000549268 ALAS2P22557 587 aa9.44□□□□□ -0.9
USP15-213ENST00000549268 AMPD1P23109 780 aa9.44□□□□□ -0.9
USP15-213ENST00000549268 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
USP15-213ENST00000549268 SNRPNP63162 240 aaKnown RBP9.44□□□□□ -0.9
USP15-213ENST00000549268 CCINQ13939 588 aa9.44□□□□□ -0.9
USP15-213ENST00000549268 CHSY3Q70JA7 882 aa9.44□□□□□ -0.9
USP15-213ENST00000549268 SAP130Q9H0E3 1048 aa9.44□□□□□ -0.9
USP15-213ENST00000549268 PIK3R2O00459 728 aa9.43□□□□□ -0.9
USP15-213ENST00000549268 SSFA2P28290 1259 aa9.43□□□□□ -0.9
USP15-213ENST00000549268 IRS1P35568 1242 aa9.43□□□□□ -0.9
USP15-213ENST00000549268 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
USP15-213ENST00000549268 KCTD17Q8N5Z5 321 aa9.43□□□□□ -0.9
USP15-213ENST00000549268 TNFRSF10BO14763 440 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 BRD1O95696 1058 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 EGFRP00533 1210 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 DGKGP49619 791 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 LINC00114Q6XXX2 140 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 TREML1Q86YW5 311 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
USP15-213ENST00000549268 MAP3K6O95382 1288 aa9.41□□□□□ -0.9
USP15-213ENST00000549268 ETFBKMTQ8IXQ9 262 aa9.41□□□□□ -0.9
USP15-213ENST00000549268 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
USP15-213ENST00000549268 BHMTQ93088 406 aa9.41□□□□□ -0.9
USP15-213ENST00000549268 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
USP15-213ENST00000549268 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.41□□□□□ -0.9
USP15-213ENST00000549268 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
USP15-213ENST00000549268 GDF11O95390 407 aa9.4□□□□□ -0.9
USP15-213ENST00000549268 NAA30Q147X3 362 aaPredicted RBP9.4□□□□□ -0.9
USP15-213ENST00000549268 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
USP15-213ENST00000549268 ALYREFQ86V81 257 aaKnown RBP9.4□□□□□ -0.9
USP15-213ENST00000549268 STIM2Q9P246 746 aa9.4□□□□□ -0.9
USP15-213ENST00000549268 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
USP15-213ENST00000549268 GNB5O14775 395 aa9.39□□□□□ -0.91
USP15-213ENST00000549268 ADH7P40394 386 aa9.39□□□□□ -0.91
USP15-213ENST00000549268 PNMA5Q96PV4 448 aa9.39□□□□□ -0.91
USP15-213ENST00000549268 PRDM6Q9NQX0 595 aa9.39□□□□□ -0.91
USP15-213ENST00000549268 FAM13BQ9NYF5 915 aa9.39□□□□□ -0.91
USP15-213ENST00000549268 PCSK7Q16549 785 aa9.38□□□□□ -0.91
USP15-213ENST00000549268 ABTB2Q8N961 1025 aa9.38□□□□□ -0.91
USP15-213ENST00000549268 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
USP15-213ENST00000549268 MTMR7Q9Y216 660 aa9.38□□□□□ -0.91
USP15-213ENST00000549268 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
USP15-213ENST00000549268 STARD13Q9Y3M8 1113 aa9.37□□□□□ -0.91
USP15-213ENST00000549268 NFKB1P19838 968 aa9.36□□□□□ -0.91
USP15-213ENST00000549268 ARID4AP29374 1257 aaPredicted RBP9.36□□□□□ -0.91
USP15-213ENST00000549268 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
USP15-213ENST00000549268 CCER1Q8TC90 406 aaPredicted RBP9.36□□□□□ -0.91
USP15-213ENST00000549268 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
USP15-213ENST00000549268 KCNMB2Q9Y691 235 aa9.36□□□□□ -0.91
USP15-213ENST00000549268 XYLBO75191 536 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms