RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 DBF4Q9UBU7 674 aaPredicted RBP10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 FKBP5Q13451 457 aaPredicted RBP10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
DEPDC4-207ENST00000549249 A1BGP04217 495 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 MYL6BP14649 208 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 INTS3Q68E01 1043 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 MFRPQ9BY79 579 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 HYPKQ9NX55 129 aa10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 TNS1Q9HBL0 1735 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-207ENST00000549249 LOC102724428A0A0B4J2F2 783 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 SIK1P57059 783 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 ITPK1Q13572 414 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 SMARCC1Q92922 1105 aaPredicted RBP10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 DDX19BQ9UMR2 479 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 SRCAPQ6ZRS2 3230 aa10.26□□□□□ -0.77
DEPDC4-207ENST00000549249 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 PI4KAP2A4QPH2 592 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 AIMP1Q12904 312 aaKnown RBP10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 PI4KAP1Q8N8J0 262 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 FBXO22Q8NEZ5 403 aa10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 TEX13AQ9BXU3 409 aaPredicted RBP10.25□□□□□ -0.77
DEPDC4-207ENST00000549249 ATP10DQ9P241 1426 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ANKRD36CQ5JPF3 1778 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 NUP98P52948 1817 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 SLC4A10Q6U841 1118 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 KSR2Q6VAB6 950 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 COPS6Q7L5N1 327 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 ZBTB1Q9Y2K1 713 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
DEPDC4-207ENST00000549249 CCT4P50991 539 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 KCNQ4P56696 695 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 BEND3Q5T5X7 828 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 INTS5Q6P9B9 1019 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 TTLL7Q6ZT98 887 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 MEIS3Q99687 375 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 MAP3K2Q9Y2U5 619 aa10.23□□□□□ -0.77
DEPDC4-207ENST00000549249 C4BP0C0L5 1744 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 STARD3NLO95772 234 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 CRKLP46109 303 aaKnown RBP10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 AAMPQ13685 434 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 LINC00116Q8NCU8 138 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 KDM2BQ8NHM5 1336 aa10.22□□□□□ -0.77
DEPDC4-207ENST00000549249 UBR3Q6ZT12 1888 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 TRIM37O94972 964 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 DDX58O95786 925 aaKnown RBP10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 HOXB3P14651 431 aaPredicted RBP10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 PLBD2Q8NHP8 589 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
DEPDC4-207ENST00000549249 SCN7AQ01118 1682 aa10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 C4AP0C0L4 1744 aa10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 RGPD3A6NKT7 1758 aaPredicted RBP10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 RGPD4Q7Z3J3 1758 aa10.21□□□□□ -0.78
DEPDC4-207ENST00000549249 APBA3O96018 575 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 IGHDP01880 384 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 IGKV5-2P06315 115 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 RIC3Q7Z5B4 369 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 TUBGCP6Q96RT7 1819 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 METTL22Q9BUU2 404 aaPredicted RBP10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 CNTNAP4Q9C0A0 1308 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 SRCIN1Q9C0H9 1055 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 USP44Q9H0E7 712 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 EP400Q96L91 3159 aa10.2□□□□□ -0.78
DEPDC4-207ENST00000549249 IBTKQ9P2D0 1353 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 ALDH1L1O75891 902 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 EIF5P55010 431 aaKnown RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 R3HDM1Q15032 1099 aaKnown RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 CWF19L2Q2TBE0 894 aaKnown RBP10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 MICALL2Q8IY33 904 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 LINS1Q8NG48 757 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 MYD88Q99836 296 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 ZBTB3Q9H5J0 574 aa10.19□□□□□ -0.78
DEPDC4-207ENST00000549249 LRRC4BQ9NT99 713 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms