RNA–Protein interactions for RNA: ENST00000549038.5

RNF41-206, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-206ENST00000549038 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
RNF41-206ENST00000549038 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.33
RNF41-206ENST00000549038 PNMA6EA0A0J9YXQ4 647 aa12.96□□□□□ -0.33
RNF41-206ENST00000549038 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
RNF41-206ENST00000549038 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
RNF41-206ENST00000549038 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
RNF41-206ENST00000549038 RFC4P35249 363 aa12.96□□□□□ -0.33
RNF41-206ENST00000549038 CASP7P55210 303 aa12.96□□□□□ -0.33
RNF41-206ENST00000549038 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
RNF41-206ENST00000549038 SMIM5Q71RC9 77 aa12.96□□□□□ -0.33
RNF41-206ENST00000549038 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
RNF41-206ENST00000549038 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
RNF41-206ENST00000549038 PARP10Q53GL7 1025 aa12.95□□□□□ -0.34
RNF41-206ENST00000549038 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
RNF41-206ENST00000549038 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
RNF41-206ENST00000549038 LY75O60449 1722 aa12.95□□□□□ -0.34
RNF41-206ENST00000549038 RREB1Q92766 1687 aa12.95□□□□□ -0.34
RNF41-206ENST00000549038 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 PHF14O94880 888 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 SSFA2P28290 1259 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 RTL5Q5HYW3 569 aaPredicted RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 LNPKQ9C0E8 428 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
RNF41-206ENST00000549038 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
RNF41-206ENST00000549038 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNF41-206ENST00000549038 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
RNF41-206ENST00000549038 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
RNF41-206ENST00000549038 BAG6P46379 1132 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 EPHA10Q5JZY3 1008 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 SUSD4Q5VX71 490 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 ERC1Q8IUD2 1116 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 AKT1S1Q96B36 256 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 PLA2G12BQ9BX93 195 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 LRRCC1Q9C099 1032 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 NOP58Q9Y2X3 529 aaKnown RBP12.93□□□□□ -0.34
RNF41-206ENST00000549038 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
RNF41-206ENST00000549038 UBN2Q6ZU65 1347 aa12.92□□□□□ -0.34
RNF41-206ENST00000549038 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
RNF41-206ENST00000549038 FOXO4P98177 505 aa12.92□□□□□ -0.34
RNF41-206ENST00000549038 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
RNF41-206ENST00000549038 EZH2Q15910 746 aaKnown RBP12.92□□□□□ -0.34
RNF41-206ENST00000549038 FLAD1Q8NFF5 587 aa12.92□□□□□ -0.34
RNF41-206ENST00000549038 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
RNF41-206ENST00000549038 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
RNF41-206ENST00000549038 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
RNF41-206ENST00000549038 PDE4AP27815 886 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
RNF41-206ENST00000549038 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 BICDL1Q6ZP65 573 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
RNF41-206ENST00000549038 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
RNF41-206ENST00000549038 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
RNF41-206ENST00000549038 APBB1O00213 710 aa12.9□□□□□ -0.34
RNF41-206ENST00000549038 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
RNF41-206ENST00000549038 ZNF827Q17R98 1081 aa12.9□□□□□ -0.34
RNF41-206ENST00000549038 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
RNF41-206ENST00000549038 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
RNF41-206ENST00000549038 PDE8AO60658 829 aa12.89□□□□□ -0.35
RNF41-206ENST00000549038 CSF1RP07333 972 aa12.89□□□□□ -0.35
RNF41-206ENST00000549038 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
RNF41-206ENST00000549038 COPRSQ9NQ92 184 aa12.89□□□□□ -0.35
RNF41-206ENST00000549038 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
RNF41-206ENST00000549038 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 NTSR2O95665 410 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 GYS1P13807 737 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 GTF2E1P29083 439 aaPredicted RBP12.88□□□□□ -0.35
RNF41-206ENST00000549038 RFX5P48382 616 aaPredicted RBP12.88□□□□□ -0.35
RNF41-206ENST00000549038 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
RNF41-206ENST00000549038 RHPN1Q8TCX5 695 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 STK32BQ9NY57 414 aa12.88□□□□□ -0.35
RNF41-206ENST00000549038 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
RNF41-206ENST00000549038 NFIXQ14938 502 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 SLC15A2Q16348 729 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
RNF41-206ENST00000549038 CLASRPQ8N2M8 674 aaKnown RBP12.87□□□□□ -0.35
RNF41-206ENST00000549038 TTLL11Q8NHH1 800 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
RNF41-206ENST00000549038 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
RNF41-206ENST00000549038 AFDNP55196 1824 aaKnown RBP12.87□□□□□ -0.35
RNF41-206ENST00000549038 NUP98P52948 1817 aa12.86□□□□□ -0.35
RNF41-206ENST00000549038 MSH5O43196 834 aa12.86□□□□□ -0.35
RNF41-206ENST00000549038 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms