RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ANAPC15P60006 121 aa16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 BLOC1S2Q6QNY1 142 aa16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 UBR1Q8IWV7 1749 aa16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 FAM177BA6PVY3 158 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 TIMM10P62072 90 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 ME3Q16798 604 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 TOM1L2Q6ZVM7 507 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 ZNF445P59923 1031 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 DDX21Q9NR30 783 aaKnown RBP eCLIP16.34■□□□□ 0.21
PRPF40B-209ENST00000548825 HSP90AA2PQ14568 343 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-209ENST00000548825 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-209ENST00000548825 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
PRPF40B-209ENST00000548825 DBNDD2Q9BQY9 259 aa16.33■□□□□ 0.2
PRPF40B-209ENST00000548825 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 CUL4AQ13619 759 aa16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 GOLIM4O00461 696 aa16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 A1BGP04217 495 aa16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 KAZALD1Q96I82 304 aa16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 TTC12Q9H892 705 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-209ENST00000548825 PXDNQ92626 1479 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 H3BQV1 296 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 IFFO2Q5TF58 517 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 F13A1P00488 732 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
PRPF40B-209ENST00000548825 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 GCKRQ14397 625 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 JAK2O60674 1132 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 HAND2P61296 217 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 SLC52A2Q9HAB3 445 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
PRPF40B-209ENST00000548825 SLC27A2O14975 620 aa16.29■□□□□ 0.2
PRPF40B-209ENST00000548825 RNF20Q5VTR2 975 aa16.29■□□□□ 0.2
PRPF40B-209ENST00000548825 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
PRPF40B-209ENST00000548825 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
PRPF40B-209ENST00000548825 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
PRPF40B-209ENST00000548825 ERBB3P21860 1342 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 PHF14O94880 888 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 WASHC4Q2M389 1173 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 DBNLQ9UJU6 430 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 HDAC5Q9UQL6 1122 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 NPHP3Q7Z494 1330 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 BRF1Q92994 677 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 TTC41PQ6P2S7 1318 aa16.28■□□□□ 0.2
PRPF40B-209ENST00000548825 GPTP24298 496 aa16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 EVA1CP58658 441 aa16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 CLEC17AQ6ZS10 378 aa16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 TSC1Q92574 1164 aa16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 A0A087WWV3 80 aa16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-209ENST00000548825 PIK3C2AO00443 1686 aa16.27■□□□□ 0.19
PRPF40B-209ENST00000548825 CYP27B1O15528 508 aa16.27■□□□□ 0.19
PRPF40B-209ENST00000548825 ADCY5O95622 1261 aa16.27■□□□□ 0.19
PRPF40B-209ENST00000548825 PHKG2P15735 406 aa16.27■□□□□ 0.19
PRPF40B-209ENST00000548825 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
PRPF40B-209ENST00000548825 PDIA6Q15084 440 aa16.26■□□□□ 0.19
PRPF40B-209ENST00000548825 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-209ENST00000548825 TTC14Q96N46 770 aa16.26■□□□□ 0.19
PRPF40B-209ENST00000548825 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
PRPF40B-209ENST00000548825 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
PRPF40B-209ENST00000548825 NCOA5Q9HCD5 579 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 HOXB7P09629 217 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 PSMA5P28066 241 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 MTMR6Q9Y217 621 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
PRPF40B-209ENST00000548825 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 Q6ZUG5 572 aa16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 SPATA32Q96LK8 384 aa16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 RPAP1Q9BWH6 1393 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms