RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 HSH2DQ96JZ2 352 aa8.88□□□□□ -0.99
CCDC38-206ENST00000548771 SLC30A3Q99726 388 aa8.88□□□□□ -0.99
CCDC38-206ENST00000548771 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
CCDC38-206ENST00000548771 IGFBP4P22692 258 aa8.87□□□□□ -0.99
CCDC38-206ENST00000548771 SRPK2P78362 688 aaKnown RBP8.87□□□□□ -0.99
CCDC38-206ENST00000548771 RSPO4Q2I0M5 234 aaPredicted RBP8.87□□□□□ -0.99
CCDC38-206ENST00000548771 TYRO3Q06418 890 aa8.86□□□□□ -0.99
CCDC38-206ENST00000548771 SYT9Q86SS6 491 aa8.86□□□□□ -0.99
CCDC38-206ENST00000548771 NEUROD4Q9HD90 331 aa8.86□□□□□ -0.99
CCDC38-206ENST00000548771 DMGDHQ9UI17 866 aaKnown RBP8.86□□□□□ -0.99
CCDC38-206ENST00000548771 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
CCDC38-206ENST00000548771 SCO2A0A1W2PP80 73 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 SIN3BO75182 1162 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 WEE1P30291 646 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 TNFRSF25Q93038 417 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 HINFPQ9BQA5 517 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 BRD7Q9NPI1 651 aa8.85□□□□□ -0.99
CCDC38-206ENST00000548771 ELOA3CA0A087WX78 387 aaPredicted RBP8.84□□□□□ -0.99
CCDC38-206ENST00000548771 ELOA3DA6NLF2 546 aaPredicted RBP8.84□□□□□ -0.99
CCDC38-206ENST00000548771 ELOA3BQ3SY89 546 aa8.84□□□□□ -0.99
CCDC38-206ENST00000548771 ELOA3Q8NG57 546 aa8.84□□□□□ -0.99
CCDC38-206ENST00000548771 BCS1LQ9Y276 419 aa8.84□□□□□ -0.99
CCDC38-206ENST00000548771 LGR5O75473 907 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 RTN1Q16799 776 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 NKAPLQ5M9Q1 402 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 IER5Q5VY09 327 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 BTLAQ7Z6A9 289 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
CCDC38-206ENST00000548771 CEP63Q96MT8 703 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 TPSG1Q9NRR2 321 aa8.83□□□□□ -1
CCDC38-206ENST00000548771 SPEM2Q0P670 501 aa8.82□□□□□ -1
CCDC38-206ENST00000548771 KCNH4Q9UQ05 1017 aa8.82□□□□□ -1
CCDC38-206ENST00000548771 FAM229AH3BQW9 127 aa8.81□□□□□ -1
CCDC38-206ENST00000548771 SPATA31C1P0DKV0 1188 aa8.81□□□□□ -1
CCDC38-206ENST00000548771 COL9A3Q14050 684 aaPredicted RBP8.81□□□□□ -1
CCDC38-206ENST00000548771 HIF1AQ16665 826 aa8.81□□□□□ -1
CCDC38-206ENST00000548771 FOXO3O43524 673 aa8.8□□□□□ -1
CCDC38-206ENST00000548771 GRNP28799 593 aaKnown RBP8.8□□□□□ -1
CCDC38-206ENST00000548771 ELOAQ14241 798 aaKnown RBP8.8□□□□□ -1
CCDC38-206ENST00000548771 CDCA8Q53HL2 280 aa8.8□□□□□ -1
CCDC38-206ENST00000548771 FAM200AQ8TCP9 573 aa8.8□□□□□ -1
CCDC38-206ENST00000548771 KRTAP4-12Q9BQ66 201 aa8.8□□□□□ -1
CCDC38-206ENST00000548771 ZMYND15Q9H091 742 aa8.8□□□□□ -1
CCDC38-206ENST00000548771 STARD13Q9Y3M8 1113 aa8.8□□□□□ -1
CCDC38-206ENST00000548771 TGFBR3LH3BV60 316 aa8.79□□□□□ -1
CCDC38-206ENST00000548771 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
CCDC38-206ENST00000548771 MYO19Q96H55 970 aa8.79□□□□□ -1
CCDC38-206ENST00000548771 NGLY1Q96IV0 654 aa8.79□□□□□ -1
CCDC38-206ENST00000548771 QTRT2Q9H974 415 aaKnown RBP8.79□□□□□ -1
CCDC38-206ENST00000548771 ZMIZ1Q9ULJ6 1067 aa8.79□□□□□ -1
CCDC38-206ENST00000548771 DYRK3O43781 588 aa8.78□□□□□ -1
CCDC38-206ENST00000548771 LCE3BQ5TA77 95 aa8.78□□□□□ -1
CCDC38-206ENST00000548771 ALAS2P22557 587 aa8.77□□□□□ -1.01
CCDC38-206ENST00000548771 RFX1P22670 979 aa8.77□□□□□ -1.01
CCDC38-206ENST00000548771 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
CCDC38-206ENST00000548771 RAB44Q7Z6P3 723 aaPredicted RBP8.77□□□□□ -1.01
CCDC38-206ENST00000548771 GSX2Q9BZM3 304 aa8.77□□□□□ -1.01
CCDC38-206ENST00000548771 EFCC1Q9HA90 598 aa8.77□□□□□ -1.01
CCDC38-206ENST00000548771 PRDM6Q9NQX0 595 aa8.77□□□□□ -1.01
CCDC38-206ENST00000548771 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1.01
CCDC38-206ENST00000548771 INPP5BP32019 993 aa8.76□□□□□ -1.01
CCDC38-206ENST00000548771 SWI5Q1ZZU3 235 aa8.76□□□□□ -1.01
CCDC38-206ENST00000548771 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
CCDC38-206ENST00000548771 ACIN1Q9UKV3 1341 aaKnown RBP8.76□□□□□ -1.01
CCDC38-206ENST00000548771 ARTNQ5T4W7 220 aa8.75□□□□□ -1.01
CCDC38-206ENST00000548771 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
CCDC38-206ENST00000548771 KLK14Q9P0G3 267 aa8.75□□□□□ -1.01
CCDC38-206ENST00000548771 LRFN2Q9ULH4 789 aa8.75□□□□□ -1.01
CCDC38-206ENST00000548771 ATG7O95352 703 aa8.74□□□□□ -1.01
CCDC38-206ENST00000548771 ADH7P40394 386 aa8.74□□□□□ -1.01
CCDC38-206ENST00000548771 OCLNQ16625 522 aa8.74□□□□□ -1.01
CCDC38-206ENST00000548771 PRSS36Q5K4E3 855 aa8.74□□□□□ -1.01
CCDC38-206ENST00000548771 ZFP64Q9NPA5 681 aa8.74□□□□□ -1.01
CCDC38-206ENST00000548771 C11orf16Q9NQ32 467 aa8.74□□□□□ -1.01
CCDC38-206ENST00000548771 ALBP02768 609 aa8.73□□□□□ -1.01
CCDC38-206ENST00000548771 FKBP5Q13451 457 aaPredicted RBP8.73□□□□□ -1.01
CCDC38-206ENST00000548771 NEUROD1Q13562 356 aa8.73□□□□□ -1.01
CCDC38-206ENST00000548771 GRIK4Q16099 956 aa8.73□□□□□ -1.01
CCDC38-206ENST00000548771 C11orf91Q3C1V1 193 aa8.73□□□□□ -1.01
CCDC38-206ENST00000548771 ILDR2Q71H61 639 aa8.73□□□□□ -1.01
CCDC38-206ENST00000548771 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.72□□□□□ -1.01
CCDC38-206ENST00000548771 M0R082 166 aa8.72□□□□□ -1.01
CCDC38-206ENST00000548771 IDH3AP50213 366 aa8.72□□□□□ -1.01
CCDC38-206ENST00000548771 DGKZQ13574 1117 aa8.72□□□□□ -1.01
CCDC38-206ENST00000548771 PRRT3Q5FWE3 981 aa8.72□□□□□ -1.01
CCDC38-206ENST00000548771 ZNF417Q8TAU3 575 aa8.72□□□□□ -1.01
CCDC38-206ENST00000548771 BHMTQ93088 406 aa8.72□□□□□ -1.01
CCDC38-206ENST00000548771 ZNF587Q96SQ5 575 aaPredicted RBP8.72□□□□□ -1.01
CCDC38-206ENST00000548771 OPLAHO14841 1288 aa8.71□□□□□ -1.02
CCDC38-206ENST00000548771 APBA3O96018 575 aa8.71□□□□□ -1.02
CCDC38-206ENST00000548771 NID1P14543 1247 aa8.71□□□□□ -1.02
CCDC38-206ENST00000548771 CCINQ13939 588 aa8.71□□□□□ -1.02
CCDC38-206ENST00000548771 STK32AQ8WU08 396 aa8.71□□□□□ -1.02
CCDC38-206ENST00000548771 MICAL2O94851 1124 aa8.7□□□□□ -1.02
CCDC38-206ENST00000548771 COX20Q5RI15 118 aa8.7□□□□□ -1.02
CCDC38-206ENST00000548771 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
CCDC38-206ENST00000548771 COL26A1Q96A83 441 aa8.69□□□□□ -1.02
CCDC38-206ENST00000548771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC38-206ENST00000548771 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms