RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
USP15-208ENST00000548524 XAGE3Q8WTP9 111 aa12.32□□□□□ -0.44
USP15-208ENST00000548524 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
USP15-208ENST00000548524 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
USP15-208ENST00000548524 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 LAMB4A4D0S4 1761 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 CCDC27Q2M243 656 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 LRP10Q7Z4F1 713 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 CNKSR1Q969H4 720 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 MASTLQ96GX5 879 aa12.31□□□□□ -0.44
USP15-208ENST00000548524 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
USP15-208ENST00000548524 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
USP15-208ENST00000548524 ELL2O00472 640 aaPredicted RBP12.3□□□□□ -0.44
USP15-208ENST00000548524 SRGNP10124 158 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 HSP90AB3PQ58FF7 597 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 SUSD4Q5VX71 490 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 WWC1Q8IX03 1113 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
USP15-208ENST00000548524 NRXN2Q9P2S2 1712 aa12.3□□□□□ -0.44
USP15-208ENST00000548524 BCORQ6W2J9 1755 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 C21orf2O43822 256 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 NPR1P16066 1061 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 RASSF7Q02833 373 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 UBN2Q6ZU65 1347 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 ADCY9O60503 1353 aa12.29□□□□□ -0.44
USP15-208ENST00000548524 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
USP15-208ENST00000548524 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
USP15-208ENST00000548524 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
USP15-208ENST00000548524 C8orf58Q8NAV2 365 aa12.28□□□□□ -0.44
USP15-208ENST00000548524 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
USP15-208ENST00000548524 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
USP15-208ENST00000548524 CHD4Q14839 1912 aa12.28□□□□□ -0.44
USP15-208ENST00000548524 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.44
USP15-208ENST00000548524 KLRG2A4D1S0 409 aaPredicted RBP12.27□□□□□ -0.45
USP15-208ENST00000548524 NTSR2O95665 410 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 EVX2Q03828 476 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 TCIRG1Q13488 830 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 SOGA3Q5TF21 947 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 ABCC12Q96J65 1359 aa12.27□□□□□ -0.45
USP15-208ENST00000548524 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
USP15-208ENST00000548524 LMNB1P20700 586 aa12.26□□□□□ -0.45
USP15-208ENST00000548524 ALDH1B1P30837 517 aa12.26□□□□□ -0.45
USP15-208ENST00000548524 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
USP15-208ENST00000548524 CCDC30Q5VVM6 783 aa12.26□□□□□ -0.45
USP15-208ENST00000548524 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
USP15-208ENST00000548524 RPGRQ92834 1020 aaKnown RBP12.26□□□□□ -0.45
USP15-208ENST00000548524 IL16Q14005 1332 aa12.26□□□□□ -0.45
USP15-208ENST00000548524 NFKBIEO00221 500 aa12.25□□□□□ -0.45
USP15-208ENST00000548524 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
USP15-208ENST00000548524 NLRP10Q86W26 655 aa12.25□□□□□ -0.45
USP15-208ENST00000548524 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
USP15-208ENST00000548524 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
USP15-208ENST00000548524 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
USP15-208ENST00000548524 NLRP3Q96P20 1036 aa12.25□□□□□ -0.45
USP15-208ENST00000548524 C1QTNF8P60827 252 aa12.24□□□□□ -0.45
USP15-208ENST00000548524 CCDC93Q567U6 631 aa12.24□□□□□ -0.45
USP15-208ENST00000548524 RBM17Q96I25 401 aaKnown RBP12.24□□□□□ -0.45
USP15-208ENST00000548524 STK31Q9BXU1 1019 aa12.24□□□□□ -0.45
USP15-208ENST00000548524 TAOK3Q9H2K8 898 aa12.24□□□□□ -0.45
USP15-208ENST00000548524 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
USP15-208ENST00000548524 RNF123Q5XPI4 1314 aa12.23□□□□□ -0.45
USP15-208ENST00000548524 SH3TC1Q8TE82 1336 aa12.23□□□□□ -0.45
USP15-208ENST00000548524 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
USP15-208ENST00000548524 DDX58O95786 925 aaKnown RBP12.23□□□□□ -0.45
USP15-208ENST00000548524 TWISTNBQ3B726 338 aaPredicted RBP12.23□□□□□ -0.45
USP15-208ENST00000548524 CRY2Q49AN0 593 aa12.23□□□□□ -0.45
USP15-208ENST00000548524 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
USP15-208ENST00000548524 PHAXQ9H814 394 aaKnown RBP12.23□□□□□ -0.45
USP15-208ENST00000548524 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
USP15-208ENST00000548524 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 TCERG1O14776 1098 aaKnown RBP12.22□□□□□ -0.45
USP15-208ENST00000548524 SLC10A5Q5PT55 438 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 C7orf43Q8WVR3 580 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 ISCA1Q9BUE6 129 aa12.22□□□□□ -0.45
USP15-208ENST00000548524 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 ANKRD31Q8N7Z5 1873 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 LTBP3Q9NS15 1303 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
USP15-208ENST00000548524 MAP3K13O43283 966 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.45
USP15-208ENST00000548524 HOXA10P31260 410 aaPredicted RBP12.21□□□□□ -0.45
USP15-208ENST00000548524 PRELPP51888 382 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 C3orf67Q6ZVT6 689 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 RTKN2Q8IZC4 609 aa12.21□□□□□ -0.45
USP15-208ENST00000548524 MYD88Q99836 296 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms